Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACLFAM_RS08170 Genome accession   NZ_CP178226
Coordinates   1630561..1631343 (+) Length   260 a.a.
NCBI ID   WP_039114615.1    Uniprot ID   -
Organism   Lactococcus lactis strain L-WY410     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1625561..1636343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLFAM_RS08145 (ACLFAM_08145) vicX 1625586..1626398 (-) 813 WP_039114610.1 MBL fold metallo-hydrolase Regulator
  ACLFAM_RS08150 (ACLFAM_08150) vicK 1626567..1628009 (-) 1443 WP_052230896.1 sensor histidine kinase Regulator
  ACLFAM_RS08155 (ACLFAM_08155) yycF 1628002..1628703 (-) 702 WP_003131580.1 response regulator YycF -
  ACLFAM_RS08160 (ACLFAM_08160) tmk 1628881..1629516 (+) 636 WP_012897230.1 dTMP kinase -
  ACLFAM_RS08165 (ACLFAM_08165) - 1629649..1630509 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  ACLFAM_RS08170 (ACLFAM_08170) yaaT 1630561..1631343 (+) 783 WP_039114615.1 stage 0 sporulation family protein Regulator
  ACLFAM_RS08175 (ACLFAM_08175) yabA 1631336..1631662 (+) 327 WP_003131570.1 DNA replication initiation control protein YabA -
  ACLFAM_RS08180 (ACLFAM_08180) rsmI 1631662..1632537 (+) 876 WP_039114617.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACLFAM_RS08185 (ACLFAM_08185) - 1632614..1632805 (-) 192 WP_012897234.1 hypothetical protein -
  ACLFAM_RS08190 (ACLFAM_08190) - 1633834..1634166 (-) 333 WP_039114618.1 hypothetical protein -
  ACLFAM_RS08195 (ACLFAM_08195) - 1634166..1634477 (-) 312 WP_039114619.1 hypothetical protein -
  ACLFAM_RS08200 (ACLFAM_08200) - 1634726..1635298 (-) 573 WP_155276098.1 hypothetical protein -
  ACLFAM_RS08205 (ACLFAM_08205) - 1635312..1635626 (-) 315 WP_039114623.1 hypothetical protein -
  ACLFAM_RS08210 (ACLFAM_08210) - 1635746..1635895 (-) 150 WP_153951467.1 hypothetical protein -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29731.21 Da        Isoelectric Point: 6.3520

>NTDB_id=971041 ACLFAM_RS08170 WP_039114615.1 1630561..1631343(+) (yaaT) [Lactococcus lactis strain L-WY410]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSGFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=971041 ACLFAM_RS08170 WP_039114615.1 1630561..1631343(+) (yaaT) [Lactococcus lactis strain L-WY410]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTTGACCAAATGCA
ACTTTTTATTTCGTTTACGGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCGAAAATTCATGGGGGACTTGGACCTTGTGGGCGTCCTTTGTGC
TGTTCTGGGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388