Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   V8V52_RS23485 Genome accession   NZ_CP150648
Coordinates   4598978..4599154 (-) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides strain 4BM1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4593978..4604154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V8V52_RS23465 (V8V52_23465) - 4594546..4595292 (-) 747 WP_002030367.1 YjbA family protein -
  V8V52_RS23470 (V8V52_23470) - 4595434..4596225 (-) 792 WP_002030365.1 DUF2268 domain-containing putative Zn-dependent protease -
  V8V52_RS23475 (V8V52_23475) fabF 4596341..4597579 (-) 1239 WP_002030364.1 beta-ketoacyl-ACP synthase II -
  V8V52_RS23480 (V8V52_23480) fabH 4597611..4598543 (-) 933 WP_001100550.1 beta-ketoacyl-ACP synthase III -
  V8V52_RS23485 (V8V52_23485) comZ 4598978..4599154 (-) 177 WP_002011319.1 ComZ family protein Regulator
  V8V52_RS23490 (V8V52_23490) - 4599219..4600091 (-) 873 WP_002188748.1 NAD(P)-dependent oxidoreductase -
  V8V52_RS23495 (V8V52_23495) - 4600121..4600855 (-) 735 WP_088035111.1 alpha/beta hydrolase -
  V8V52_RS23500 (V8V52_23500) - 4601012..4601194 (+) 183 WP_001211112.1 YjzD family protein -
  V8V52_RS23505 (V8V52_23505) clpB 4601226..4603826 (-) 2601 WP_088035114.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=970940 V8V52_RS23485 WP_002011319.1 4598978..4599154(-) (comZ) [Bacillus mycoides strain 4BM1]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=970940 V8V52_RS23485 WP_002011319.1 4598978..4599154(-) (comZ) [Bacillus mycoides strain 4BM1]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment