Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | V8V52_RS01545 | Genome accession | NZ_CP150648 |
| Coordinates | 283301..283585 (+) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides strain 4BM1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 278301..288585
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V8V52_RS01530 (V8V52_01530) | rnmV | 279046..279603 (-) | 558 | WP_002029323.1 | ribonuclease M5 | - |
| V8V52_RS01535 (V8V52_01535) | - | 279864..280631 (-) | 768 | WP_002009645.1 | TatD family hydrolase | - |
| V8V52_RS01540 (V8V52_01540) | metG | 280797..282779 (-) | 1983 | WP_002029324.1 | methionine--tRNA ligase | - |
| V8V52_RS01545 (V8V52_01545) | abrB | 283301..283585 (+) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| V8V52_RS01550 (V8V52_01550) | rsmI | 283606..284481 (-) | 876 | WP_002130208.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| V8V52_RS01555 (V8V52_01555) | - | 284450..284740 (-) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| V8V52_RS01560 (V8V52_01560) | - | 284727..285467 (-) | 741 | WP_088030743.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| V8V52_RS01565 (V8V52_01565) | yabA | 285588..285938 (-) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| V8V52_RS01570 (V8V52_01570) | - | 285953..286780 (-) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| V8V52_RS01575 (V8V52_01575) | holB | 286786..287769 (-) | 984 | WP_002009636.1 | DNA polymerase III subunit delta' | - |
| V8V52_RS01580 (V8V52_01580) | tmk | 287805..288431 (-) | 627 | WP_002130202.1 | dTMP kinase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=970901 V8V52_RS01545 WP_000843037.1 283301..283585(+) (abrB) [Bacillus mycoides strain 4BM1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=970901 V8V52_RS01545 WP_000843037.1 283301..283585(+) (abrB) [Bacillus mycoides strain 4BM1]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |