Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACLII2_RS21965 Genome accession   NZ_CP178213
Coordinates   4174950..4175777 (-) Length   275 a.a.
NCBI ID   WP_003243571.1    Uniprot ID   P37541
Organism   Bacillus subtilis subsp. subtilis strain BM107     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 4169950..4180777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLII2_RS21940 abrB 4172296..4172586 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  ACLII2_RS21945 rsmI 4172635..4173513 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACLII2_RS21950 yazA 4173488..4173787 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  ACLII2_RS21955 trmNF 4173774..4174517 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACLII2_RS21960 yabA 4174576..4174935 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  ACLII2_RS21965 yaaT 4174950..4175777 (-) 828 WP_003243571.1 competence/sporulation regulator complex protein RicT Regulator
  ACLII2_RS21970 holB 4175780..4176769 (-) 990 WP_003244417.1 DNA polymerase III subunit delta' -
  ACLII2_RS21975 yaaR 4176781..4177221 (-) 441 WP_009966249.1 YaaR family protein -
  ACLII2_RS21980 darA 4177234..4177563 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  ACLII2_RS21985 tmk 4177637..4178275 (-) 639 WP_003243137.1 dTMP kinase -
  ACLII2_RS21990 efpO 4178272..4179714 (-) 1443 WP_003243352.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31219.06 Da        Isoelectric Point: 4.7658

>NTDB_id=970870 ACLII2_RS21965 WP_003243571.1 4174950..4175777(-) (yaaT) [Bacillus subtilis subsp. subtilis strain BM107]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=970870 ACLII2_RS21965 WP_003243571.1 4174950..4175777(-) (yaaT) [Bacillus subtilis subsp. subtilis strain BM107]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGATCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P37541

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment