Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACLII2_RS16590 Genome accession   NZ_CP178213
Coordinates   3139244..3139987 (-) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis subsp. subtilis strain BM107     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3134244..3144987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLII2_RS16570 - 3134623..3136014 (+) 1392 WP_003233218.1 hypothetical protein -
  ACLII2_RS16575 sndC 3136087..3137277 (+) 1191 WP_003245681.1 N-acetyl amino acid acetylase SndC -
  ACLII2_RS16580 ecsC 3137295..3138005 (-) 711 WP_003233225.1 EcsC family protein -
  ACLII2_RS16585 ecsB 3138025..3139251 (-) 1227 WP_003245169.1 ABC transporter permease EcsB -
  ACLII2_RS16590 pptA 3139244..3139987 (-) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  ACLII2_RS16595 hinT 3140475..3140912 (+) 438 WP_003233231.1 HIT family protein -
  ACLII2_RS16600 serC 3141059..3142138 (+) 1080 WP_003233234.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  ACLII2_RS16605 trpP 3142263..3142781 (+) 519 WP_003233236.1 tryptophan transporter TrpP -
  ACLII2_RS16610 - 3142855..3143046 (-) 192 WP_003233238.1 hypothetical protein -
  ACLII2_RS16615 yhaH 3143176..3143532 (+) 357 WP_003245875.1 YtxH domain-containing protein -
  ACLII2_RS16620 scoC 3143710..3144321 (+) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  ACLII2_RS16625 yhaI 3144318..3144659 (-) 342 WP_009966921.1 YhaI family protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=970834 ACLII2_RS16590 WP_003233230.1 3139244..3139987(-) (pptA) [Bacillus subtilis subsp. subtilis strain BM107]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=970834 ACLII2_RS16590 WP_003233230.1 3139244..3139987(-) (pptA) [Bacillus subtilis subsp. subtilis strain BM107]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547

Multiple sequence alignment