Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   WIF35_RS13410 Genome accession   NZ_CP150631
Coordinates   2755548..2755919 (+) Length   123 a.a.
NCBI ID   WP_412478720.1    Uniprot ID   -
Organism   Azonexus sp. IMCC34839     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2750548..2760919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WIF35_RS13385 mgtE 2750721..2752163 (+) 1443 WP_412481246.1 magnesium transporter -
  WIF35_RS13390 - 2752218..2752487 (-) 270 WP_412481247.1 DMT family transporter -
  WIF35_RS13395 hemL 2752553..2753836 (-) 1284 WP_412478717.1 glutamate-1-semialdehyde 2,1-aminomutase -
  WIF35_RS13400 thiE 2753839..2754462 (-) 624 WP_412478718.1 thiamine phosphate synthase -
  WIF35_RS13405 thiD 2754455..2755321 (-) 867 WP_412478719.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  WIF35_RS13410 pilG 2755548..2755919 (+) 372 WP_412478720.1 response regulator Regulator
  WIF35_RS13415 - 2755936..2756301 (+) 366 WP_412478721.1 response regulator transcription factor -
  WIF35_RS13420 - 2756307..2756819 (+) 513 WP_412478722.1 chemotaxis protein CheW -
  WIF35_RS13425 - 2756859..2758994 (+) 2136 WP_412478723.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 123 a.a.        Molecular weight: 13637.82 Da        Isoelectric Point: 6.9246

>NTDB_id=970730 WIF35_RS13410 WP_412478720.1 2755548..2755919(+) (pilG) [Azonexus sp. IMCC34839]
MVIDDSNTIRRSAEIFLVQAGCQVVLAEDGFDALAKITDHQPAVIFCDIMMPRLDGYQTCSLIKKNARFKSTPVIMLSSK
DGLFDRARGRMVGSDQYLTKPFTKDSLLQMVATFALPAESESK

Nucleotide


Download         Length: 372 bp        

>NTDB_id=970730 WIF35_RS13410 WP_412478720.1 2755548..2755919(+) (pilG) [Azonexus sp. IMCC34839]
ATGGTGATCGACGACAGCAACACCATTCGGCGTAGCGCTGAGATTTTTCTCGTGCAGGCCGGGTGTCAGGTGGTGCTGGC
CGAGGATGGCTTCGATGCGCTGGCCAAAATTACGGATCACCAGCCGGCAGTGATTTTTTGCGACATCATGATGCCGCGCC
TCGATGGCTATCAGACCTGTTCGCTGATCAAGAAGAATGCGCGTTTCAAAAGTACGCCGGTCATCATGCTGTCCTCCAAG
GATGGCCTGTTCGACCGGGCGCGAGGGCGTATGGTCGGTTCCGATCAGTATCTGACCAAACCCTTCACCAAGGACAGTCT
GCTGCAGATGGTGGCCACCTTTGCACTGCCGGCTGAATCTGAATCCAAATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

64.865

90.244

0.585

Multiple sequence alignment