Detailed information NTG0970714

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: WIF35_RS03755
• Genome accession: NZ_CP150631
• Coordinates: 737009..738370 (-)
• Length: 453 a.a.
• NCBI ID: WP_412480231.1
• Uniprot ID: -
• Organism: Azonexus sp. IMCC34839
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 732009..743370

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WIF35_RS03745	-	732411..734897 (-)	2487	WP_412480229.1	ABC transporter permease	-
WIF35_RS03750	-	734894..736981 (-)	2088	WP_412480230.1	putative bifunctional diguanylate cyclase/phosphodiesterase	-
WIF35_RS03755	radA	737009..738370 (-)	1362	WP_412480231.1	DNA repair protein RadA	Machinery gene
WIF35_RS03760	alr	738371..739465 (-)	1095	WP_412480232.1	alanine racemase	-
WIF35_RS03765	-	739462..740364 (-)	903	WP_412480233.1	LysR family transcriptional regulator	-
WIF35_RS03770	lplT	740630..741895 (+)	1266	WP_412480234.1	lysophospholipid transporter LplT	-
WIF35_RS03775	-	741940..742707 (+)	768	WP_412480235.1	hypothetical protein	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 48394.83 Da
• Isoelectric Point: 7.7011

>NTDB_id=970714 WIF35_RS03755 WP_412480231.1 737009..738370(-) (radA) [Azonexus sp. IMCC34839]
MAKTKTIYSCTECGATSPKWQGQCPGCGEWNTLVEAIAEKAPANHRFESLAPNAKLQTLSEIEAREAERIPTGISEFDRA
LGGGLVAGGVVLIGGDPGIGKSTLLLQALSHLSTGHKVLYVSGEESGEQVALRARRLSLDTRQLQLMAEINLERILATLQ
AEKPQVAVIDSIQTLWSDQLSSAPGSVAQVRECAAQLTRLAKQSGITVILVGHVTKEGALAGPRVLEHIVDTVLYFEGDT
HSSFRLVRAFKNRFGAVNELGVFAMTDKGLKGVNNPSALFLSQHGQDVAGSCVLVTQEGTRPLLVEIQALVDTAHGNPRR
LTVGLDAQRLAMLLAVLHRHAGVVCFDQDVFVNAVGGVKISEPAADLAVLLSITSSLKNKPLPAKLIVFGEVGLAGEIRP
APRGQERLKEAAKLGFTRALIPEANRPKQAIPGMEVIAVKRVEEAVARLRELE

Nucleotide

• Length: 1362 bp

>NTDB_id=970714 WIF35_RS03755 WP_412480231.1 737009..738370(-) (radA) [Azonexus sp. IMCC34839]
ATGGCAAAAACCAAGACCATCTATAGCTGCACCGAGTGCGGCGCGACTAGCCCGAAATGGCAGGGGCAGTGCCCCGGCTG
CGGCGAATGGAATACGCTGGTCGAGGCGATTGCCGAAAAAGCGCCGGCCAATCACCGCTTCGAATCGCTGGCGCCAAATG
CCAAGTTGCAGACCCTGTCGGAAATCGAGGCGCGCGAAGCGGAGCGTATCCCTACCGGAATTTCCGAGTTTGACCGGGCG
CTTGGCGGCGGATTGGTTGCCGGCGGCGTCGTGCTGATCGGTGGCGACCCCGGCATCGGCAAGAGCACCTTGCTGTTGCA
GGCGCTATCGCATCTGTCGACCGGCCACAAGGTGCTCTACGTCAGCGGCGAGGAGTCGGGTGAGCAGGTCGCCTTGCGGG
CGCGTCGTTTGAGCCTTGATACCCGCCAACTCCAGTTGATGGCCGAGATCAACCTGGAGCGCATCCTGGCCACGCTGCAG
GCGGAAAAGCCGCAGGTCGCGGTGATCGATTCGATCCAGACCCTGTGGTCGGATCAGCTCTCCAGTGCGCCGGGATCGGT
CGCCCAGGTGCGCGAATGCGCAGCGCAACTGACCCGCCTGGCCAAGCAATCGGGCATCACGGTGATCCTGGTCGGCCATG
TGACCAAGGAGGGCGCCCTGGCCGGGCCACGCGTGCTCGAGCACATCGTCGATACCGTGCTCTATTTCGAAGGCGACACG
CATTCCAGCTTCCGTCTGGTACGAGCCTTCAAGAATCGCTTTGGCGCGGTCAATGAACTGGGCGTCTTCGCCATGACCGA
CAAGGGGCTGAAGGGCGTGAACAACCCGTCGGCGCTTTTCCTGTCGCAGCACGGGCAGGACGTGGCCGGTTCCTGCGTCT
TGGTGACGCAGGAAGGAACACGACCGCTACTGGTGGAAATCCAGGCGCTGGTCGATACGGCGCACGGCAATCCGCGACGG
CTCACGGTGGGCCTGGATGCGCAGCGTCTGGCCATGCTGCTGGCGGTCTTGCACCGGCACGCCGGTGTGGTCTGCTTCGA
TCAGGATGTTTTCGTCAATGCCGTTGGCGGCGTCAAGATCAGCGAGCCGGCAGCCGATCTGGCGGTACTCTTGTCCATCA
CCTCGTCGCTGAAGAACAAGCCCTTGCCGGCCAAGCTGATCGTGTTCGGCGAGGTCGGGCTGGCCGGTGAAATTCGCCCG
GCACCGCGCGGGCAGGAGCGTTTGAAGGAAGCAGCCAAGCTCGGTTTCACACGCGCCCTGATTCCTGAAGCGAATCGGCC
CAAACAAGCGATACCGGGCATGGAGGTCATTGCCGTCAAACGCGTGGAGGAAGCGGTGGCGCGCCTGCGTGAGTTGGAAT
AA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (61-218)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (356-446)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	51.327	99.779	0.512
radA	Streptococcus mitis SK321	48.23	99.779	0.481
radA	Streptococcus pneumoniae D39	47.672	99.558	0.475
radA	Streptococcus pneumoniae TIGR4	47.672	99.558	0.475
radA	Streptococcus pneumoniae R6	47.672	99.558	0.475
radA	Streptococcus pneumoniae Rx1	47.672	99.558	0.475
radA	Streptococcus mitis NCTC 12261	47.45	99.558	0.472