Detailed information NTG0970706

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACLSTD_RS21555
• Genome accession: NZ_CP178206
• Coordinates: 4412303..4413328 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain K-12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4407303..4418328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLSTD_RS21535 (ACLSTD_21535)	metJ	4408364..4408681 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACLSTD_RS21540 (ACLSTD_21540)	yiiX	4408865..4409473 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACLSTD_RS21545 (ACLSTD_21545)	rpmE	4409534..4409746 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACLSTD_RS21550 (ACLSTD_21550)	priA	4409949..4412147 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACLSTD_RS21555 (ACLSTD_21555)	cytR	4412303..4413328 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACLSTD_RS21560 (ACLSTD_21560)	ftsN	4413420..4414379 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACLSTD_RS21565 (ACLSTD_21565)	hslV	4414472..4415002 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACLSTD_RS21570 (ACLSTD_21570)	hslU	4415012..4416343 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACLSTD_RS21575 (ACLSTD_21575)	menA	4416410..4417336 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACLSTD_RS21580 (ACLSTD_21580)	rraA	4417429..4417914 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACLSTD_RS21585 (ACLSTD_21585)	zapB	4417999..4418244 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=970706 ACLSTD_RS21555 WP_000644904.1 4412303..4413328(+) (cytR) [Escherichia coli strain K-12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=970706 ACLSTD_RS21555 WP_000644904.1 4412303..4413328(+) (cytR) [Escherichia coli strain K-12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628