Detailed information NTG0970554

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: WHC13_RS02165
• Genome accession: NZ_CP150487
• Coordinates: 428429..429577 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain JNF2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423429..434577

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHC13_RS02145 (WHC13_02145)	yclH	423806..424486 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
WHC13_RS02150 (WHC13_02150)	yclI	424502..425962 (-)	1461	WP_003234506.1	ABC transporter permease	-
WHC13_RS02155 (WHC13_02155)	yclJ	426175..426858 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
WHC13_RS02160 (WHC13_02160)	yclK	426845..428266 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
WHC13_RS02165 (WHC13_02165)	rapC	428429..429577 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
WHC13_RS02170 (WHC13_02170)	phrC	429561..429683 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
WHC13_RS02175 (WHC13_02175)	yczM	429783..429872 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
WHC13_RS02180 (WHC13_02180)	yczN	429954..430067 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
WHC13_RS02185 (WHC13_02185)	thrD	430221..431585 (-)	1365	WP_003234493.1	aspartate kinase	-
WHC13_RS02190 (WHC13_02190)	ceuB	431970..432920 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
WHC13_RS02195 (WHC13_02195)	yclO	432913..433860 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=970554 WHC13_RS02165 WP_003246686.1 428429..429577(+) (rapC) [Bacillus subtilis strain JNF2]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=970554 WHC13_RS02165 WP_003246686.1 428429..429577(+) (rapC) [Bacillus subtilis strain JNF2]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571