Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | WHC13_RS01985 | Genome accession | NZ_CP150487 |
| Coordinates | 371754..372203 (-) | Length | 149 a.a. |
| NCBI ID | WP_003246436.1 | Uniprot ID | A0AAE2SFQ0 |
| Organism | Bacillus subtilis strain JNF2 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 366754..377203
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHC13_RS01950 (WHC13_01950) | yckA | 366905..367585 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| WHC13_RS01955 (WHC13_01955) | yckB | 367595..368458 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| WHC13_RS01960 (WHC13_01960) | - | 368620..368817 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| WHC13_RS01965 (WHC13_01965) | yckC | 368836..369291 (+) | 456 | WP_003246356.1 | RDD family protein | - |
| WHC13_RS01970 (WHC13_01970) | yckD | 369373..369705 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| WHC13_RS01975 (WHC13_01975) | bglC | 369859..371292 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| WHC13_RS01980 (WHC13_01980) | nin/comJ | 371329..371727 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| WHC13_RS01985 (WHC13_01985) | nucA/comI | 371754..372203 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| WHC13_RS01990 (WHC13_01990) | tlpC | 372371..374092 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| WHC13_RS01995 (WHC13_01995) | hxlB | 374203..374760 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| WHC13_RS02000 (WHC13_02000) | hxlA | 374766..375398 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| WHC13_RS02005 (WHC13_02005) | hxlR | 375631..375993 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16486.48 Da Isoelectric Point: 4.6274
>NTDB_id=970552 WHC13_RS01985 WP_003246436.1 371754..372203(-) (nucA/comI) [Bacillus subtilis strain JNF2]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=970552 WHC13_RS01985 WP_003246436.1 371754..372203(-) (nucA/comI) [Bacillus subtilis strain JNF2]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |