Detailed information NTG0970550

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACLSTA_RS00285
• Genome accession: NZ_CP178203
• Coordinates: 45136..46161 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain APEC17
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 40136..51161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLSTA_RS00255 (ACLSTA_00255)	zapB	40220..40465 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACLSTA_RS00260 (ACLSTA_00260)	rraA	40550..41035 (-)	486	WP_000872909.1	ribonuclease E activity regulator RraA	-
ACLSTA_RS00265 (ACLSTA_00265)	menA	41128..42054 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACLSTA_RS00270 (ACLSTA_00270)	hslU	42121..43452 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACLSTA_RS00275 (ACLSTA_00275)	hslV	43462..43992 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACLSTA_RS00280 (ACLSTA_00280)	ftsN	44085..45044 (-)	960	WP_000068818.1	cell division protein FtsN	-
ACLSTA_RS00285 (ACLSTA_00285)	cytR	45136..46161 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACLSTA_RS00290 (ACLSTA_00290)	priA	46317..48515 (-)	2199	WP_001318166.1	primosomal protein N'	Machinery gene
ACLSTA_RS00295 (ACLSTA_00295)	rpmE	48718..48930 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACLSTA_RS00300 (ACLSTA_00300)	yiiX	48991..49599 (-)	609	WP_000702299.1	YiiX family permuted papain-like enzyme	-
ACLSTA_RS00305 (ACLSTA_00305)	metJ	49659..49976 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=970550 ACLSTA_RS00285 WP_000644904.1 45136..46161(-) (cytR) [Escherichia coli strain APEC17]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=970550 ACLSTA_RS00285 WP_000644904.1 45136..46161(-) (cytR) [Escherichia coli strain APEC17]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628