Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   SOZ35_RS07750 Genome accession   NZ_CP150480
Coordinates   1512596..1513171 (+) Length   191 a.a.
NCBI ID   WP_003327252.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain TL401     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1507596..1518171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOZ35_RS07720 (SOZ35_07720) dapD 1507717..1508427 (+) 711 WP_003327258.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  SOZ35_RS07725 (SOZ35_07725) - 1508500..1509624 (+) 1125 WP_061670698.1 N-acetyldiaminopimelate deacetylase -
  SOZ35_RS07730 (SOZ35_07730) - 1509685..1509930 (+) 246 WP_003327256.1 YkuS family protein -
  SOZ35_RS07735 (SOZ35_07735) - 1509969..1510772 (-) 804 WP_003327255.1 mechanosensitive ion channel family protein -
  SOZ35_RS07740 (SOZ35_07740) ahpA 1511022..1511564 (+) 543 WP_003327254.1 biofilm-specific peroxidase AhpA -
  SOZ35_RS07745 (SOZ35_07745) - 1511649..1512107 (+) 459 WP_003327253.1 TlpA disulfide reductase family protein -
  SOZ35_RS07750 (SOZ35_07750) rok 1512596..1513171 (+) 576 WP_003327252.1 transcriptional regulator Rok Regulator
  SOZ35_RS07755 (SOZ35_07755) - 1513217..1514176 (-) 960 WP_010788466.1 hypothetical protein -
  SOZ35_RS07760 (SOZ35_07760) - 1514320..1514904 (+) 585 WP_010788467.1 molybdenum cofactor guanylyltransferase -
  SOZ35_RS07765 (SOZ35_07765) - 1514976..1515995 (+) 1020 WP_010788468.1 MoeB/ThiF family adenylyltransferase -
  SOZ35_RS07770 (SOZ35_07770) glp 1516015..1517307 (+) 1293 WP_340640563.1 gephyrin-like molybdotransferase Glp -
  SOZ35_RS07775 (SOZ35_07775) mobB 1517268..1517792 (+) 525 WP_340640564.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21713.65 Da        Isoelectric Point: 9.8783

>NTDB_id=970477 SOZ35_RS07750 WP_003327252.1 1512596..1513171(+) (rok) [Bacillus atrophaeus strain TL401]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSSAAETKKDFRPERKSESLPVLAELAAQEIRSYQPQ
QASQPQPQSISSIPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQSL
IKMYPEVKKPYRGQYILEGEIASDSAENVTE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=970477 SOZ35_RS07750 WP_003327252.1 1512596..1513171(+) (rok) [Bacillus atrophaeus strain TL401]
ATGTTTAATGAGAGGGAAGCTTTACGCTTGCGTTTGGAACAGTTAAATGAGGCTGAGGTTAAAGTCATCCGTGAATATCA
AATAGAGCGTGACAAAATATATGCAAAACTAAGAGAGCTTGACCGCAATGGAAGCTCAGCAGCGGAAACAAAAAAAGATT
TTCGCCCTGAAAGAAAAAGTGAGTCTCTTCCTGTGCTAGCCGAGCTCGCAGCACAAGAGATCAGAAGCTATCAGCCGCAG
CAGGCATCACAGCCGCAGCCGCAATCCATCTCCTCTATTCCGGCGGGTATTCCGGACGGAACGACAAGAAGAAGAAGAGG
AACGGCAAGACCGGGTTCAAAGGCAGCAAAGCTTCGTGAAGCGGCAATCAAAACATTAAAACGCCATAACGCAGCGATCA
AAAGCTCCGAACTTCAAAAGGAAATTGAGAAGGAAAGCGGGCTTGAAATCCCTAATATGACAACGTTTATGCAAAGTTTA
ATTAAAATGTATCCGGAAGTGAAAAAGCCATATCGCGGCCAGTACATTTTAGAAGGCGAAATCGCTTCAGACTCTGCTGA
AAATGTGACTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.598

100

0.88

Multiple sequence alignment