Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   SOZ35_RS07645 Genome accession   NZ_CP150480
Coordinates   1495305..1495769 (-) Length   154 a.a.
NCBI ID   WP_003327274.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain TL401     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490305..1500769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOZ35_RS07625 (SOZ35_07625) - 1490752..1492572 (+) 1821 WP_268482144.1 PAS domain-containing protein -
  SOZ35_RS07630 (SOZ35_07630) - 1492595..1493764 (-) 1170 WP_088117074.1 aminotransferase A -
  SOZ35_RS07635 (SOZ35_07635) - 1493970..1494131 (-) 162 WP_003327276.1 hypothetical protein -
  SOZ35_RS07640 (SOZ35_07640) cheV 1494340..1495251 (+) 912 WP_063637619.1 chemotaxis protein CheV -
  SOZ35_RS07645 (SOZ35_07645) kre 1495305..1495769 (-) 465 WP_003327274.1 YkyB family protein Regulator
  SOZ35_RS07650 (SOZ35_07650) - 1495892..1497187 (-) 1296 WP_340640560.1 MFS transporter -
  SOZ35_RS07655 (SOZ35_07655) - 1497263..1497760 (-) 498 WP_087941879.1 L,D-transpeptidase family protein -
  SOZ35_RS07660 (SOZ35_07660) - 1497896..1498756 (-) 861 WP_340640561.1 metallophosphoesterase -
  SOZ35_RS07665 (SOZ35_07665) fadH 1498903..1499667 (+) 765 WP_003327269.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17942.68 Da        Isoelectric Point: 10.4207

>NTDB_id=970476 SOZ35_RS07645 WP_003327274.1 1495305..1495769(-) (kre) [Bacillus atrophaeus strain TL401]
MDDHAYTKDLRPTIENLSKAVYTVNRHAKTAPNPKYLYTLKKRALQKLVKEGKGKKVGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKNLLQDYVGMKEKPFVTNRQQPTYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=970476 SOZ35_RS07645 WP_003327274.1 1495305..1495769(-) (kre) [Bacillus atrophaeus strain TL401]
ATGGACGACCATGCATATACGAAAGATCTGCGGCCAACCATCGAAAATCTTTCAAAAGCTGTCTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATACTTTGAAAAAACGGGCTTTACAAAAGCTGGTGAAAGAAGGTAAAG
GAAAGAAAGTAGGGCTTCATTTTTCAAAAAACCCAAGGTTTAGCCAACAGCAATCGGACGTGCTCATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCGAACACCTTCCGCATTTAGGTACGCTAAATCAATCGTACCGGAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAAAACCTTTTGCAAGATTATGTCGGCATGAAAGAAAAACCGTTTGTCA
CAAATCGGCAGCAGCCAACTTACCATAAACCTGTTTTCAAAAAGCTTGGAGAAAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

94.156

100

0.942

Multiple sequence alignment