Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   SOZ35_RS06170 Genome accession   NZ_CP150480
Coordinates   1238422..1239078 (+) Length   218 a.a.
NCBI ID   WP_010788243.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain TL401     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1233422..1244078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOZ35_RS06145 (SOZ35_06145) oppF 1233652..1234569 (+) 918 WP_035175065.1 oligopeptide ABC transporter ATP-binding protein OppF -
  SOZ35_RS06150 (SOZ35_06150) - 1234949..1236139 (+) 1191 WP_340640466.1 putative glycoside hydrolase -
  SOZ35_RS06155 (SOZ35_06155) - 1236290..1236868 (+) 579 WP_003327580.1 GNAT family N-acetyltransferase -
  SOZ35_RS06160 (SOZ35_06160) spx 1237049..1237444 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  SOZ35_RS06165 (SOZ35_06165) - 1237480..1238142 (-) 663 WP_003327577.1 TerC family protein -
  SOZ35_RS06170 (SOZ35_06170) mecA 1238422..1239078 (+) 657 WP_010788243.1 adaptor protein MecA Regulator
  SOZ35_RS06175 (SOZ35_06175) coiA 1239238..1240401 (+) 1164 WP_010788244.1 competence protein CoiA family protein Machinery gene
  SOZ35_RS06180 (SOZ35_06180) pepF 1240630..1242459 (+) 1830 WP_003327574.1 oligoendopeptidase F -
  SOZ35_RS06185 (SOZ35_06185) - 1242496..1242663 (-) 168 WP_003327573.1 hypothetical protein -
  SOZ35_RS06190 (SOZ35_06190) spxH 1242978..1243880 (-) 903 WP_003327572.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 26005.73 Da        Isoelectric Point: 3.9783

>NTDB_id=970470 SOZ35_RS06170 WP_010788243.1 1238422..1239078(+) (mecA) [Bacillus atrophaeus strain TL401]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEQADENLDALLDDFQKEEQADNQEEKEQKLQFVLRFDDFEDLISLSNLNVNGSKTTLYSFENR
YYLYVDFQEMSDEEVENQLSILLEYTYESSISIHRIEEYGKLIISEDVLDTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=970470 SOZ35_RS06170 WP_010788243.1 1238422..1239078(+) (mecA) [Bacillus atrophaeus strain TL401]
ATGGAAATAGAAAGAATAAACGAACATACTGTAAAGTTTTATATGTCATATGGAGATATTGAAGACCGCGGTTTCGACAG
AGAAGAGATTTGGTATAACCGTGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTTCATGAGGAAGAAGAAT
TCGCTGTAGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTCGATAAAGGCTTGGAGATTATCGTTACAAAAGCCCAGCTT
TCTAAAGACGGACAAAAGCTCGAACTGCCGATACCTGAAGATAAAAAGCAAGAACAAGCAGATGAGAATCTCGATGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGCCGACAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTCGTCTTGCGGTTTG
ATGATTTTGAGGACTTGATTTCTCTTTCAAATTTGAACGTAAACGGAAGCAAAACGACGCTTTATTCGTTTGAAAACCGG
TATTATTTATATGTAGATTTTCAAGAAATGTCTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTAGAGTACACATA
TGAATCCTCAATCAGCATACACCGCATCGAAGAATACGGCAAGCTGATTATTTCAGAGGATGTTCTGGATACAATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

92.661

100

0.927

Multiple sequence alignment