Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SOZ35_RS04555 Genome accession   NZ_CP150480
Coordinates   928069..928860 (+) Length   263 a.a.
NCBI ID   WP_340640367.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain TL401     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 923069..933860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOZ35_RS04525 (SOZ35_04525) - 923913..924926 (+) 1014 WP_087941833.1 iron ABC transporter permease -
  SOZ35_RS04530 (SOZ35_04530) - 925044..925925 (+) 882 WP_340640364.1 PhzF family phenazine biosynthesis isomerase -
  SOZ35_RS04535 (SOZ35_04535) - 926006..926590 (+) 585 WP_340640365.1 nitroreductase -
  SOZ35_RS04540 (SOZ35_04540) - 926630..926821 (-) 192 WP_004430587.1 YfhD family protein -
  SOZ35_RS04545 (SOZ35_04545) - 926898..927008 (-) 111 WP_003223230.1 YfhE family protein -
  SOZ35_RS04550 (SOZ35_04550) - 927067..927978 (-) 912 WP_063638874.1 TIGR01777 family oxidoreductase -
  SOZ35_RS04555 (SOZ35_04555) recX 928069..928860 (+) 792 WP_340640367.1 recombination regulator RecX Regulator
  SOZ35_RS04560 (SOZ35_04560) - 928868..929194 (+) 327 WP_010788005.1 YfhH family protein -
  SOZ35_RS04565 (SOZ35_04565) - 929330..930529 (+) 1200 WP_010788006.1 MFS transporter -
  SOZ35_RS04570 (SOZ35_04570) - 930570..930722 (-) 153 WP_004430596.1 small, acid-soluble spore protein K -
  SOZ35_RS04575 (SOZ35_04575) - 930840..931109 (+) 270 WP_340640368.1 YfhJ family protein -
  SOZ35_RS04580 (SOZ35_04580) - 931237..931773 (+) 537 WP_094231666.1 SH3 domain-containing protein -
  SOZ35_RS04585 (SOZ35_04585) - 931914..932261 (+) 348 WP_010788008.1 SdpI family protein -
  SOZ35_RS04590 (SOZ35_04590) - 932248..933114 (+) 867 WP_340640369.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30880.14 Da        Isoelectric Point: 8.2224

>NTDB_id=970458 SOZ35_RS04555 WP_340640367.1 928069..928860(+) (recX) [Bacillus atrophaeus strain TL401]
MPFITKITTQKKTTERFNIFLDNKYAFSVDADVLVKFDLKKGKELDDLDIVEIQYGDEVKKGFNRALEFLSYRMRSTKEV
TDHLKKKEISDPAITEIIHKLNDYRYLNDKEFAEAYASTHKKTNGKGPDVLYKELRSKGIDDDTIKGTLSTFSFEEQTEE
ALKHIGKILKKEKKLSTKEIKQRAQMLLQRKGFSFDVITAALEQTEYANDEDTEREALRQHAEKALRKYRYDGSYESKMK
VKQYLFRKGFSLDMIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=970458 SOZ35_RS04555 WP_340640367.1 928069..928860(+) (recX) [Bacillus atrophaeus strain TL401]
ATGCCGTTTATCACGAAAATCACAACGCAGAAAAAAACGACCGAGCGCTTTAACATTTTTCTCGATAATAAATATGCTTT
CAGTGTGGATGCGGACGTACTCGTCAAATTCGACCTGAAAAAAGGAAAAGAACTCGACGACCTTGATATCGTTGAAATTC
AATACGGGGATGAAGTAAAGAAAGGCTTTAACCGGGCGCTTGAATTTTTATCATACCGGATGCGCTCAACAAAAGAGGTA
ACGGACCATTTAAAGAAGAAAGAAATATCTGATCCGGCCATTACAGAAATCATCCATAAGCTGAATGATTATCGCTATCT
GAATGATAAAGAGTTCGCAGAAGCTTATGCGAGCACACATAAGAAAACAAATGGAAAGGGACCGGACGTTCTTTATAAAG
AGTTAAGGTCAAAGGGGATCGATGATGATACGATCAAAGGGACATTAAGCACATTTTCTTTTGAGGAACAGACAGAAGAG
GCGCTGAAGCATATTGGAAAAATCCTAAAAAAAGAAAAAAAGCTCTCTACAAAAGAAATCAAGCAGCGAGCGCAAATGCT
TCTGCAGCGAAAGGGCTTCTCCTTCGACGTCATCACAGCGGCGCTTGAGCAGACCGAGTATGCAAACGATGAAGATACAG
AAAGGGAAGCGTTACGGCAGCACGCTGAAAAGGCGCTAAGAAAATACCGATATGACGGCTCCTACGAGAGCAAGATGAAG
GTAAAACAATATTTATTCAGAAAAGGATTCTCACTGGATATGATTGACCAATTTCTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

82.51

100

0.825

Multiple sequence alignment