Detailed information NTG0097035

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AACH74_RS23395
• Genome accession: NZ_AP029000
• Coordinates: 4813527..4814552 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GU2018_CL13
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4808527..4819552

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACH74_RS23375 (GU2018CL13_44870)	metJ	4809712..4810029 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AACH74_RS23380 (GU2018CL13_44880)	yiiX	4810089..4810697 (+)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
AACH74_RS23385 (GU2018CL13_44890)	rpmE	4810758..4810970 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AACH74_RS23390 (GU2018CL13_44900)	priA	4811173..4813371 (+)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
AACH74_RS23395 (GU2018CL13_44910)	cytR	4813527..4814552 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AACH74_RS23400 (GU2018CL13_44920)	ftsN	4814644..4815603 (+)	960	WP_000068834.1	cell division protein FtsN	-
AACH74_RS23405 (GU2018CL13_44930)	hslV	4815696..4816226 (+)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
AACH74_RS23410 (GU2018CL13_44940)	hslU	4816236..4817567 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AACH74_RS23415 (GU2018CL13_44950)	menA	4817634..4818560 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AACH74_RS23420 (GU2018CL13_44960)	rraA	4818653..4819138 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AACH74_RS23425 (GU2018CL13_44970)	zapB	4819223..4819468 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=97035 AACH74_RS23395 WP_000644904.1 4813527..4814552(+) (cytR) [Escherichia coli strain GU2018_CL13]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=97035 AACH74_RS23395 WP_000644904.1 4813527..4814552(+) (cytR) [Escherichia coli strain GU2018_CL13]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628