Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACLF6N_RS21205 Genome accession   NZ_CP177279
Coordinates   3961248..3961937 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain KFRI-P74     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3956248..3966937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLF6N_RS21185 (ACLF6N_21185) yxeA 3957193..3957540 (-) 348 WP_121591316.1 YxeA family protein -
  ACLF6N_RS21190 (ACLF6N_21190) yxdM 3957554..3959422 (-) 1869 WP_121591317.1 ABC transporter permease YxdM -
  ACLF6N_RS21195 (ACLF6N_21195) tpeL 3959397..3960130 (-) 734 Protein_4121 ABC transporter ATP-binding protein -
  ACLF6N_RS21200 (ACLF6N_21200) yxdK 3960274..3961251 (-) 978 WP_014481410.1 two-component system sensor histidine kinase YxdK -
  ACLF6N_RS21205 (ACLF6N_21205) braR 3961248..3961937 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  ACLF6N_RS21210 (ACLF6N_21210) iolJ 3962045..3962917 (-) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  ACLF6N_RS21215 (ACLF6N_21215) iolI 3962938..3963774 (-) 837 WP_014481412.1 2-keto-myo-inositol isomerase -
  ACLF6N_RS21220 (ACLF6N_21220) iolH 3963860..3964729 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase family protein -
  ACLF6N_RS21225 (ACLF6N_21225) iolG 3964749..3965783 (-) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=970343 ACLF6N_RS21205 WP_003243527.1 3961248..3961937(-) (braR) [Bacillus subtilis strain KFRI-P74]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=970343 ACLF6N_RS21205 WP_003243527.1 3961248..3961937(-) (braR) [Bacillus subtilis strain KFRI-P74]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATACCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment