Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ACLF6N_RS16610 Genome accession   NZ_CP177279
Coordinates   3071506..3072369 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain KFRI-P74     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3066506..3077369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLF6N_RS16575 (ACLF6N_16575) mrpE 3066674..3067150 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ACLF6N_RS16580 (ACLF6N_16580) mrpF 3067150..3067434 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ACLF6N_RS16585 (ACLF6N_16585) mnhG 3067418..3067792 (+) 375 WP_324271460.1 monovalent cation/H(+) antiporter subunit G -
  ACLF6N_RS16590 (ACLF6N_16590) yuxO 3067831..3068211 (-) 381 WP_069837723.1 hotdog fold thioesterase -
  ACLF6N_RS16595 (ACLF6N_16595) comA 3068230..3068874 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACLF6N_RS16600 (ACLF6N_16600) comP 3068955..3071267 (-) 2313 WP_103330147.1 sensor histidine kinase Regulator
  ACLF6N_RS16605 (ACLF6N_16605) comX 3071283..3071504 (-) 222 WP_014480704.1 competence pheromone ComX -
  ACLF6N_RS16610 (ACLF6N_16610) comQ 3071506..3072369 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  ACLF6N_RS16615 (ACLF6N_16615) degQ 3072554..3072694 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACLF6N_RS16620 (ACLF6N_16620) - 3072916..3073041 (+) 126 WP_003228793.1 hypothetical protein -
  ACLF6N_RS16625 (ACLF6N_16625) - 3073156..3073524 (+) 369 WP_046381300.1 hypothetical protein -
  ACLF6N_RS16630 (ACLF6N_16630) pdeH 3073500..3074729 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  ACLF6N_RS16635 (ACLF6N_16635) pncB 3074865..3076337 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ACLF6N_RS16640 (ACLF6N_16640) pncA 3076353..3076904 (-) 552 WP_014480709.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=970321 ACLF6N_RS16610 WP_014480705.1 3071506..3072369(-) (comQ) [Bacillus subtilis strain KFRI-P74]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=970321 ACLF6N_RS16610 WP_014480705.1 3071506..3072369(-) (comQ) [Bacillus subtilis strain KFRI-P74]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439