Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | OPA53_RS15550 | Genome accession | NZ_AP026794 |
| Coordinates | 3140353..3140982 (-) | Length | 209 a.a. |
| NCBI ID | WP_000839151.1 | Uniprot ID | A0A066SWI0 |
| Organism | Escherichia coli strain IPCEC48 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3135353..3145982
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OPA53_RS15535 (IPCEC48_29860) | helD | 3135595..3137649 (-) | 2055 | WP_001295938.1 | DNA helicase IV | - |
| OPA53_RS15540 (IPCEC48_29870) | yccF | 3137772..3138218 (+) | 447 | WP_001261235.1 | YccF domain-containing protein | - |
| OPA53_RS15545 (IPCEC48_29880) | yccS | 3138228..3140390 (+) | 2163 | WP_000875041.1 | YccS family putative transporter | - |
| OPA53_RS15550 (IPCEC48_29890) | sxy/tfoX | 3140353..3140982 (-) | 630 | WP_000839151.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| OPA53_RS15555 (IPCEC48_29900) | sulA | 3141201..3141710 (+) | 510 | WP_000288707.1 | SOS-induced cell division inhibitor SulA | - |
| OPA53_RS15560 (IPCEC48_29910) | ompA | 3142065..3143117 (+) | 1053 | WP_001346420.1 | porin OmpA | - |
| OPA53_RS15565 (IPCEC48_29920) | matP | 3143193..3143645 (-) | 453 | WP_000877153.1 | macrodomain Ter protein MatP | - |
| OPA53_RS15570 (IPCEC48_29930) | ycbZ | 3143831..3145591 (+) | 1761 | WP_000156502.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24163.08 Da Isoelectric Point: 9.0428
>NTDB_id=97032 OPA53_RS15550 WP_000839151.1 3140353..3140982(-) (sxy/tfoX) [Escherichia coli strain IPCEC48]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
CLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
CLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=97032 OPA53_RS15550 WP_000839151.1 3140353..3140982(-) (sxy/tfoX) [Escherichia coli strain IPCEC48]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGAGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
TGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCAGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGAGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
TGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCAGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.522 |
100 |
0.995 |