Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MHH77_RS04225 Genome accession   NZ_CP150435
Coordinates   887160..887951 (+) Length   263 a.a.
NCBI ID   WP_268497959.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-2837     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 882160..892951
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH77_RS04190 (MHH77_04190) - 882247..882795 (+) 549 WP_058015766.1 thioredoxin family protein -
  MHH77_RS04195 (MHH77_04195) - 883133..883600 (+) 468 WP_058015767.1 DUF393 domain-containing protein -
  MHH77_RS04200 (MHH77_04200) - 883637..884893 (-) 1257 WP_061407125.1 transcriptional regulator -
  MHH77_RS04205 (MHH77_04205) - 885166..885753 (+) 588 WP_339165293.1 nitroreductase -
  MHH77_RS04210 (MHH77_04210) - 885789..885944 (-) 156 WP_012009317.1 YfhD family protein -
  MHH77_RS04215 (MHH77_04215) - 886006..886116 (-) 111 WP_017358836.1 YfhE family protein -
  MHH77_RS04220 (MHH77_04220) - 886169..887065 (-) 897 WP_106033152.1 TIGR01777 family oxidoreductase -
  MHH77_RS04225 (MHH77_04225) recX 887160..887951 (+) 792 WP_268497959.1 recombination regulator RecX Regulator
  MHH77_RS04230 (MHH77_04230) - 887955..888269 (+) 315 WP_169057378.1 YfhH family protein -
  MHH77_RS04235 (MHH77_04235) - 888292..888465 (-) 174 WP_003217811.1 YpzG family protein -
  MHH77_RS04240 (MHH77_04240) - 888491..888640 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  MHH77_RS04245 (MHH77_04245) - 888757..889029 (+) 273 WP_003217809.1 YfhJ family protein -
  MHH77_RS04250 (MHH77_04250) - 889320..890303 (+) 984 WP_212046482.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30707.10 Da        Isoelectric Point: 6.6679

>NTDB_id=970273 MHH77_RS04225 WP_268497959.1 887160..887951(+) (recX) [Bacillus sp. FSL K6-2837]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIDIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDNIEQALSQYPDDLQLEE
AVKQVQKLVRKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMMEKAKRKVGYDGSFEKRMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=970273 MHH77_RS04225 WP_268497959.1 887160..887951(+) (recX) [Bacillus sp. FSL K6-2837]
ATGCCCTATATTACAAAAATCTCCGCTCAGAAAAACAATACAGAGCGGGTAAACATCTTTCTTGATGAAAAGTACGCGTT
TAGCGTGGATCTAGATGTGCTCGTCCAGCACGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATCGACATTC
AATTCGGTGATGCTGTGAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCCTACCGAATGAGATCGGTGAAAGAAGTC
ACCGATTACTTGACGAAAAAAGAAATCCCGGCACCTGCCATTAGTGAAATTATACACAAATTAAAGCATTACAAGTATGT
AAATGATCTTGAATTTGCGGAAGCCTATGTCAGCACCCACCGTAAAACGAACAGCAAAGGGCCGTCCGTCCTGAAAAAAG
AGCTAAAGCTCAAAGGGATAGATGATGACAACATTGAACAAGCACTATCGCAATATCCTGATGACTTACAGCTGGAGGAA
GCTGTGAAGCAGGTTCAGAAGCTTGTGAGAAAAGAAAAAAATCGCTCCGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAAGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCGCTCCTTTATATGATGGAGAAGGCAAAACGAAAGGTAGGATACGACGGATCATTTGAAAAGAGGATGAAG
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGACACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

62.738

100

0.627

Multiple sequence alignment