Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MHH77_RS01995 Genome accession   NZ_CP150435
Coordinates   369443..369871 (-) Length   142 a.a.
NCBI ID   WP_169057407.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-2837     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 364443..374871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH77_RS01965 (MHH77_01965) - 364598..364927 (+) 330 WP_339165778.1 YckD family protein -
  MHH77_RS01970 (MHH77_01970) - 364977..365741 (-) 765 WP_061406708.1 MBL fold metallo-hydrolase -
  MHH77_RS01975 (MHH77_01975) - 365857..366273 (+) 417 WP_034664465.1 Lrp/AsnC family transcriptional regulator -
  MHH77_RS01980 (MHH77_01980) - 366303..367109 (+) 807 WP_058015285.1 AAC(3) family N-acetyltransferase -
  MHH77_RS01985 (MHH77_01985) - 367111..367497 (-) 387 WP_339164879.1 competence protein ComJ -
  MHH77_RS01990 (MHH77_01990) - 367618..369315 (-) 1698 WP_339164881.1 methyl-accepting chemotaxis protein -
  MHH77_RS01995 (MHH77_01995) nucA/comI 369443..369871 (-) 429 WP_169057407.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MHH77_RS02000 (MHH77_02000) - 370239..372308 (+) 2070 WP_144463110.1 hydantoinase/oxoprolinase family protein -
  MHH77_RS02005 (MHH77_02005) - 372298..374283 (+) 1986 WP_144463108.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15884.82 Da        Isoelectric Point: 5.5491

>NTDB_id=970271 MHH77_RS01995 WP_169057407.1 369443..369871(-) (nucA/comI) [Bacillus sp. FSL K6-2837]
MKLLKIILLLLLIIVGVATGYIQLEQGKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSVCTIDRKHSDEQREQS
LHGIPTKRGYDRDEWPMAMCKEGGTGASVKYISPSDNRGAGSWVGHQLSDDPDGTRIQFIID

Nucleotide


Download         Length: 429 bp        

>NTDB_id=970271 MHH77_RS01995 WP_169057407.1 369443..369871(-) (nucA/comI) [Bacillus sp. FSL K6-2837]
ATGAAACTTCTTAAAATCATTCTCTTGCTTTTACTGATCATCGTTGGTGTAGCAACAGGCTATATTCAGCTGGAGCAAGG
TAAACAAGAGACGACGAATTCATCTTATGACAAAACGATTCACTTCCCATCAGATCGTTACCCCGAAACCGCGAAGCACA
TAGAAGAGGCAATTGATGAAGGCCATTCATCCGTATGTACAATTGACCGTAAACATAGCGATGAACAAAGAGAACAATCA
CTTCATGGCATCCCAACAAAGCGCGGATATGATCGGGACGAATGGCCGATGGCGATGTGTAAGGAAGGAGGAACAGGAGC
TTCAGTCAAATACATTAGTCCTTCAGATAATAGAGGAGCAGGCTCATGGGTCGGTCATCAATTATCAGATGATCCTGACG
GCACAAGAATACAATTTATCATCGATTAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

74.528

74.648

0.556

Multiple sequence alignment