Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACLF6N_RS00220 Genome accession   NZ_CP177279
Coordinates   41798..42625 (+) Length   275 a.a.
NCBI ID   WP_041338386.1    Uniprot ID   -
Organism   Bacillus subtilis strain KFRI-P74     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36798..47625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLF6N_RS00195 (ACLF6N_00195) efpO 37861..39303 (+) 1443 WP_021479734.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ACLF6N_RS00200 (ACLF6N_00200) tmk 39300..39938 (+) 639 WP_069322312.1 dTMP kinase -
  ACLF6N_RS00205 (ACLF6N_00205) darA 40012..40341 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  ACLF6N_RS00210 (ACLF6N_00210) yaaR 40354..40794 (+) 441 WP_009966249.1 YaaR family protein -
  ACLF6N_RS00215 (ACLF6N_00215) holB 40806..41795 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  ACLF6N_RS00220 (ACLF6N_00220) yaaT 41798..42625 (+) 828 WP_041338386.1 competence/sporulation regulator complex protein RicT Regulator
  ACLF6N_RS00225 (ACLF6N_00225) yabA 42640..42999 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  ACLF6N_RS00230 (ACLF6N_00230) trmNF 43058..43801 (+) 744 WP_041338388.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACLF6N_RS00235 (ACLF6N_00235) yazA 43788..44087 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  ACLF6N_RS00240 (ACLF6N_00240) rsmI 44062..44940 (+) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACLF6N_RS00245 (ACLF6N_00245) abrB 44989..45279 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31247.11 Da        Isoelectric Point: 4.7741

>NTDB_id=970205 ACLF6N_RS00220 WP_041338386.1 41798..42625(+) (yaaT) [Bacillus subtilis strain KFRI-P74]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=970205 ACLF6N_RS00220 WP_041338386.1 41798..42625(+) (yaaT) [Bacillus subtilis strain KFRI-P74]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGATGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGAGATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTATGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.273

100

0.993