Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHI53_RS23205 Genome accession   NZ_CP150304
Coordinates   4786193..4787143 (-) Length   316 a.a.
NCBI ID   WP_340372393.1    Uniprot ID   -
Organism   Peribacillus sp. FSL E2-0218     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4781193..4792143
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI53_RS23185 (MHI53_23185) - 4781678..4783036 (-) 1359 WP_340371729.1 IS1182 family transposase -
  MHI53_RS23190 (MHI53_23190) - 4783349..4784296 (-) 948 WP_340372391.1 siderophore ABC transporter substrate-binding protein -
  MHI53_RS23195 (MHI53_23195) - 4784501..4785259 (-) 759 WP_340372392.1 ABC transporter ATP-binding protein -
  MHI53_RS23200 (MHI53_23200) - 4785253..4786200 (-) 948 WP_100532970.1 iron chelate uptake ABC transporter family permease subunit -
  MHI53_RS23205 (MHI53_23205) ceuB 4786193..4787143 (-) 951 WP_340372393.1 ABC transporter permease Machinery gene
  MHI53_RS23210 (MHI53_23210) - 4787470..4787739 (+) 270 WP_185113035.1 DUF1450 domain-containing protein -
  MHI53_RS23215 (MHI53_23215) - 4788007..4789662 (+) 1656 WP_340372394.1 M14 family metallocarboxypeptidase -
  MHI53_RS23220 (MHI53_23220) shc 4789822..4791717 (+) 1896 WP_340372395.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34974.27 Da        Isoelectric Point: 9.3237

>NTDB_id=970114 MHI53_RS23205 WP_340372393.1 4786193..4787143(-) (ceuB) [Peribacillus sp. FSL E2-0218]
MKIRYLVIALVILSFTSLFIGVKDITPLDLLDLTDDKVQIMLQSRLPRMVTIIIAGVVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLALIIFPSAALIEKMVFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGMMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYVSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKFVVNFGLVIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKNSLSHTALLGAVFLLFCDILGRIIIYPFEIPIGLVVGVIGSVVFIYLIMRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=970114 MHI53_RS23205 WP_340372393.1 4786193..4787143(-) (ceuB) [Peribacillus sp. FSL E2-0218]
ATGAAGATAAGATATTTAGTTATTGCTTTAGTCATTTTATCCTTTACTTCATTGTTCATTGGCGTAAAGGATATTACCCC
CCTCGATTTATTGGACTTAACCGATGATAAAGTGCAGATCATGCTGCAAAGCCGTCTCCCCAGAATGGTTACGATCATCA
TTGCCGGAGTGGTGATGAGCATAAGCGGACTGATCATGCAGCAATTGAGCCGCAATAAGTTTGTTTCGCCCACCACTGCA
GGTACGATGGATTCTGCAAGGCTTGGCCTCCTGCTTGCCCTTATCATCTTTCCATCAGCCGCCCTTATCGAGAAAATGGT
ATTCGCTTTCATATTCGCTTTGGCAGGTACCTTCTTGTTCATGAAGATTCTTGATCAAGTCAAATATAAGGATACGATCT
TCATTCCATTGGTTGGGATGATGTTTGGCAATATCGTCGGTTCCATCTCGACCTTCTTTGCTTACAAATATGATTTGATC
CAAAGCCTCAATACCTGGATGAATGGCGATTTTTCGATGATCATGTCGGGAAGGTACGAGCTTATATATGTTAGTATCCC
GTTAGTCATTCTCGCCTATTTCTTTGCCAATAAATTCACTGTGGCAGGCATGGGCGAGGAGTTCGCCATCAACCTGGGGC
TCAATTATAAATTCGTCGTCAACTTCGGCTTGGTTATCGTGGCCTTATCCTCGACAGTCGTTTTGCTGACGGTGGGGACC
ATACCTTTCATAGGATTGATCGTACCGAATATTGTATCCCTTTACCTTGGTGATAATTTGAAAAACAGCCTTTCTCATAC
AGCGTTGCTAGGGGCCGTGTTCCTATTGTTCTGCGATATTCTGGGCAGGATCATCATTTATCCATTTGAAATCCCGATCG
GTCTCGTGGTGGGTGTGATAGGAAGCGTCGTATTCATCTATCTGATAATGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.051

100

0.491

Multiple sequence alignment