Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | MHH48_RS29175 | Genome accession | NZ_CP150303 |
| Coordinates | 6424116..6424556 (-) | Length | 146 a.a. |
| NCBI ID | WP_076324707.1 | Uniprot ID | A0A1R1AWW1 |
| Organism | Paenibacillus sp. FSL F4-0100 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 6419116..6429556
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHH48_RS29150 (MHH48_29150) | - | 6420104..6421240 (-) | 1137 | WP_076324702.1 | HAMP domain-containing sensor histidine kinase | - |
| MHH48_RS29155 (MHH48_29155) | - | 6421233..6421913 (-) | 681 | WP_076324703.1 | response regulator transcription factor | - |
| MHH48_RS29160 (MHH48_29160) | - | 6422019..6422585 (-) | 567 | WP_076324704.1 | methyltransferase domain-containing protein | - |
| MHH48_RS29165 (MHH48_29165) | - | 6422630..6423109 (-) | 480 | WP_076324705.1 | DedA family protein | - |
| MHH48_RS29170 (MHH48_29170) | yjcZ | 6423515..6423625 (-) | 111 | WP_083659774.1 | sporulation protein YjcZ | - |
| MHH48_RS29175 (MHH48_29175) | nucA/comI | 6424116..6424556 (-) | 441 | WP_076324707.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| MHH48_RS29180 (MHH48_29180) | groL | 6424784..6426412 (-) | 1629 | WP_076324708.1 | chaperonin GroEL | - |
| MHH48_RS29185 (MHH48_29185) | groES | 6426475..6426756 (-) | 282 | WP_006212454.1 | co-chaperone GroES | - |
| MHH48_RS29190 (MHH48_29190) | - | 6427035..6427853 (-) | 819 | WP_076324709.1 | nucleotidyltransferase domain-containing protein | - |
| MHH48_RS29195 (MHH48_29195) | tatC | 6428153..6428926 (-) | 774 | WP_076324710.1 | twin-arginine translocase subunit TatC | - |
| MHH48_RS29200 (MHH48_29200) | - | 6428999..6429235 (-) | 237 | WP_076324711.1 | twin-arginine translocase TatA/TatE family subunit | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 16200.14 Da Isoelectric Point: 4.3001
>NTDB_id=970066 MHH48_RS29175 WP_076324707.1 6424116..6424556(-) (nucA/comI) [Paenibacillus sp. FSL F4-0100]
MKKLFLKFGTAVLSLLLVWLVLNYFPELDDIDVNQPIPGTVVELEFPADRYPETADHIQKAIESGHSEVCTIDRTGADDN
RSSSLKGIPTKKGYDRDEWPMAMCAEGGDGASVEYIDPSDNRGAGSWVGNYLEGYPDGTQVHFIFR
MKKLFLKFGTAVLSLLLVWLVLNYFPELDDIDVNQPIPGTVVELEFPADRYPETADHIQKAIESGHSEVCTIDRTGADDN
RSSSLKGIPTKKGYDRDEWPMAMCAEGGDGASVEYIDPSDNRGAGSWVGNYLEGYPDGTQVHFIFR
Nucleotide
Download Length: 441 bp
>NTDB_id=970066 MHH48_RS29175 WP_076324707.1 6424116..6424556(-) (nucA/comI) [Paenibacillus sp. FSL F4-0100]
ATGAAAAAGTTATTCTTGAAATTTGGAACAGCGGTCTTATCCTTGTTATTGGTTTGGTTGGTCCTTAATTATTTTCCGGA
GTTAGATGACATTGATGTAAACCAACCAATACCGGGTACCGTTGTCGAATTGGAGTTTCCAGCGGATAGATATCCTGAGA
CAGCGGATCACATACAAAAGGCCATTGAATCCGGCCATTCCGAAGTTTGTACCATTGATCGAACTGGTGCAGATGATAAC
CGGAGTTCTTCGCTAAAAGGAATCCCTACAAAAAAAGGATATGATCGGGATGAGTGGCCGATGGCCATGTGTGCCGAAGG
CGGGGACGGTGCAAGTGTCGAATACATAGATCCATCTGACAATCGAGGAGCGGGAAGCTGGGTAGGTAACTATTTGGAGG
GATACCCGGACGGTACCCAAGTACATTTCATTTTTAGATAG
ATGAAAAAGTTATTCTTGAAATTTGGAACAGCGGTCTTATCCTTGTTATTGGTTTGGTTGGTCCTTAATTATTTTCCGGA
GTTAGATGACATTGATGTAAACCAACCAATACCGGGTACCGTTGTCGAATTGGAGTTTCCAGCGGATAGATATCCTGAGA
CAGCGGATCACATACAAAAGGCCATTGAATCCGGCCATTCCGAAGTTTGTACCATTGATCGAACTGGTGCAGATGATAAC
CGGAGTTCTTCGCTAAAAGGAATCCCTACAAAAAAAGGATATGATCGGGATGAGTGGCCGATGGCCATGTGTGCCGAAGG
CGGGGACGGTGCAAGTGTCGAATACATAGATCCATCTGACAATCGAGGAGCGGGAAGCTGGGTAGGTAACTATTTGGAGG
GATACCCGGACGGTACCCAAGTACATTTCATTTTTAGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
70.874 |
70.548 |
0.5 |