Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NST93_RS17005 Genome accession   NZ_CP150301
Coordinates   3330490..3331443 (+) Length   317 a.a.
NCBI ID   WP_405099096.1    Uniprot ID   -
Organism   Oceanobacillus sp. FSL H7-0719     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3325490..3336443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST93_RS16980 (NST93_16900) - 3326450..3326989 (-) 540 WP_405099087.1 HD domain-containing protein -
  NST93_RS16985 (NST93_16905) - 3327044..3327475 (-) 432 WP_405099089.1 MarR family winged helix-turn-helix transcriptional regulator -
  NST93_RS16990 (NST93_16910) - 3327646..3328146 (+) 501 WP_405099091.1 CarD family transcriptional regulator -
  NST93_RS16995 (NST93_16915) fni 3328249..3329301 (+) 1053 WP_405099093.1 type 2 isopentenyl-diphosphate Delta-isomerase -
  NST93_RS17000 (NST93_16920) - 3329488..3330204 (+) 717 WP_405099095.1 DsbA family oxidoreductase -
  NST93_RS17005 (NST93_16925) ceuB 3330490..3331443 (+) 954 WP_405099096.1 ABC transporter permease Machinery gene
  NST93_RS17010 (NST93_16930) - 3331433..3332383 (+) 951 WP_405099098.1 iron chelate uptake ABC transporter family permease subunit -
  NST93_RS17015 (NST93_16935) - 3332377..3333132 (+) 756 WP_405099100.1 ABC transporter ATP-binding protein -
  NST93_RS17020 (NST93_16940) - 3333566..3334576 (+) 1011 WP_405099102.1 siderophore ABC transporter substrate-binding protein -
  NST93_RS17025 (NST93_16945) - 3334945..3335658 (+) 714 WP_405099104.1 SurA N-terminal domain-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34927.13 Da        Isoelectric Point: 10.1147

>NTDB_id=970012 NST93_RS17005 WP_405099096.1 3330490..3331443(+) (ceuB) [Oceanobacillus sp. FSL H7-0719]
MKIRYLVILLFVFSLLSVFIGVSNVTPLDLFSLTDAQKQVLLVSRVPRLFSIVIAGMSMSIVGLIMQQLSRNKFVSPTTA
GTLDSARLGILVSMMIFTAASPLQKMLVSFAFALAGTFIFMKILDKVKFKDAVFIPLVGLMFGNIISSISTFFAYQNDLI
QNMSSWMQGDFSMIMSGNYELMFISIPLLFIAYLYANKFTIAGMGEDFSKSLGLKYRQVVNLGLIISALVTASVVLSVGV
IPFLGLIIPNIVTIYQGDHLKNTLIHTALLGAVFVLFCDIVGRVVIYPYEIPISLTVGVIGSGIFIYLLLRRKKYGL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=970012 NST93_RS17005 WP_405099096.1 3330490..3331443(+) (ceuB) [Oceanobacillus sp. FSL H7-0719]
ATGAAAATAAGGTATCTCGTTATATTACTATTTGTTTTTTCATTGCTTTCCGTCTTTATAGGAGTTTCAAATGTTACTCC
TCTTGATTTATTCAGTTTAACGGATGCGCAAAAACAAGTATTGTTGGTCAGCAGAGTTCCGCGATTGTTCAGTATTGTAA
TCGCAGGCATGAGCATGAGTATTGTTGGTCTGATCATGCAGCAGCTAAGTCGGAATAAGTTTGTTTCGCCTACAACTGCT
GGAACATTAGATTCAGCAAGATTAGGTATATTAGTATCGATGATGATTTTCACTGCAGCATCTCCATTGCAAAAAATGCT
TGTTTCATTCGCATTTGCTTTAGCTGGTACTTTTATCTTTATGAAAATCCTGGATAAAGTAAAGTTTAAAGATGCAGTCT
TCATCCCATTAGTTGGCTTGATGTTTGGTAATATTATTAGCTCAATTTCAACATTTTTTGCTTATCAAAATGATTTGATT
CAAAATATGTCGTCCTGGATGCAGGGTGATTTTTCCATGATAATGAGTGGGAATTATGAGCTGATGTTTATAAGCATACC
ACTTCTTTTTATTGCATATCTTTATGCAAACAAATTTACGATTGCAGGCATGGGAGAGGACTTCTCTAAAAGTCTGGGAT
TAAAATATCGGCAGGTTGTTAACTTAGGGTTGATTATCAGTGCCCTTGTTACTGCTTCAGTAGTTTTATCAGTTGGGGTT
ATCCCATTTCTTGGGTTAATCATTCCTAACATCGTTACTATTTACCAAGGTGATCATTTGAAAAACACCTTAATACATAC
CGCATTGCTAGGTGCAGTATTTGTTCTGTTTTGTGATATTGTCGGCAGGGTTGTTATTTATCCATATGAGATTCCAATCA
GCTTAACAGTTGGGGTAATAGGTAGCGGAATATTCATCTATCTATTATTAAGGAGAAAGAAATATGGGTTATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

99.685

0.521

Multiple sequence alignment