Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   ACI7Q4_RS10070 Genome accession   NZ_CP177227
Coordinates   2150144..2150500 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain FS26     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2145144..2155500
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI7Q4_RS10045 (ACI7Q4_10045) fabF 2145356..2146600 (+) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -
  ACI7Q4_RS10050 (ACI7Q4_10050) pabC 2146600..2147415 (+) 816 WP_003110198.1 aminodeoxychorismate lyase -
  ACI7Q4_RS10055 (ACI7Q4_10055) mltG 2147421..2148470 (+) 1050 WP_003104128.1 endolytic transglycosylase MltG -
  ACI7Q4_RS10060 (ACI7Q4_10060) tmk 2148499..2149131 (+) 633 WP_023517788.1 dTMP kinase -
  ACI7Q4_RS10065 (ACI7Q4_10065) - 2149124..2150110 (+) 987 WP_003104126.1 DNA polymerase III subunit delta' -
  ACI7Q4_RS10070 (ACI7Q4_10070) pilZ 2150144..2150500 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  ACI7Q4_RS10075 (ACI7Q4_10075) - 2150515..2151291 (+) 777 WP_003091117.1 TatD family hydrolase -
  ACI7Q4_RS10080 (ACI7Q4_10080) - 2151517..2152650 (-) 1134 WP_003118082.1 aminotransferase class V-fold PLP-dependent enzyme -
  ACI7Q4_RS10085 (ACI7Q4_10085) - 2152736..2153374 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  ACI7Q4_RS10090 (ACI7Q4_10090) - 2153524..2154420 (+) 897 WP_023517787.1 radical SAM protein -
  ACI7Q4_RS10095 (ACI7Q4_10095) - 2154485..2155117 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence


Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=969931 ACI7Q4_RS10070 WP_003091119.1 2150144..2150500(+) (pilZ) [Pseudomonas aeruginosa strain FS26]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=969931 ACI7Q4_RS10070 WP_003091119.1 2150144..2150500(+) (pilZ) [Pseudomonas aeruginosa strain FS26]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains


Predicted by InterProScan.

(17-106)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449

  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449