Detailed information NTG0969918

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ACI7Q4_RS06760
• Genome accession: NZ_CP177227
• Coordinates: 1439800..1440804 (+)
• Length: 334 a.a.
• NCBI ID: WP_003113871.1
• Uniprot ID: A0A0H2ZEU1
• Organism: Pseudomonas aeruginosa strain FS26
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 1434800..1445804

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI7Q4_RS06730 (ACI7Q4_06730)	fghA	1434892..1435743 (+)	852	WP_033942610.1	S-formylglutathione hydrolase	-
ACI7Q4_RS06735 (ACI7Q4_06735)	ispF	1435814..1436287 (+)	474	WP_003092346.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
ACI7Q4_RS06740 (ACI7Q4_06740)	truD	1436284..1437351 (+)	1068	WP_023114621.1	tRNA pseudouridine(13) synthase TruD	-
ACI7Q4_RS06745 (ACI7Q4_06745)	surE	1437339..1438088 (+)	750	WP_003092341.1	5'/3'-nucleotidase SurE	-
ACI7Q4_RS06750 (ACI7Q4_06750)	-	1438121..1438756 (+)	636	WP_003098558.1	protein-L-isoaspartate(D-aspartate) O-methyltransferase	-
ACI7Q4_RS06755 (ACI7Q4_06755)	-	1438802..1439695 (+)	894	WP_003143263.1	peptidoglycan DD-metalloendopeptidase family protein	-
ACI7Q4_RS06760 (ACI7Q4_06760)	rpoS	1439800..1440804 (+)	1005	WP_003113871.1	RNA polymerase sigma factor RpoS	Regulator
ACI7Q4_RS06765 (ACI7Q4_06765)	fdxA	1441231..1441554 (-)	324	WP_003119354.1	ferredoxin FdxA	-
ACI7Q4_RS06770 (ACI7Q4_06770)	mutS	1441621..1444188 (-)	2568	WP_003113873.1	DNA mismatch repair protein MutS	-
ACI7Q4_RS06775 (ACI7Q4_06775)	-	1444314..1445321 (-)	1008	WP_003098486.1	TolB family protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 38235.38 Da
• Isoelectric Point: 5.0478

>NTDB_id=969918 ACI7Q4_RS06760 WP_003113871.1 1439800..1440804(+) (rpoS) [Pseudomonas aeruginosa strain FS26]
MALKKEGPEFDHDDEVLLLEPGIMLDESSADEQPSPRATPKATTSFSSKQHKHIDYTRALDATQLYLNEIGFSPLLTPEE
EVHFARLAQKGDPAGRKRMIESNLRLVVKIARRYVNRGLSLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIE
RAIMNQTRTIRLPIHVVKELNVYLRAARELTHKLDHEPSPEEIANLLEKPVAEVKRMLGLNERVTSVDVSLGPDSDKTLL
DTLTDDRPTDPCELLQDDDLSESIDQWLTELTDKQREVVIRRFGLRGHESSTLEEVGQEIGLTRERVRQIQVEALKRLRE
ILEKNGLSSDALFQ

Nucleotide

• Length: 1005 bp

>NTDB_id=969918 ACI7Q4_RS06760 WP_003113871.1 1439800..1440804(+) (rpoS) [Pseudomonas aeruginosa strain FS26]
ATGGCACTCAAAAAAGAAGGGCCGGAGTTTGACCACGATGATGAAGTGCTCCTCCTGGAGCCCGGCATCATGCTGGACGA
GTCGTCTGCCGACGAGCAGCCTTCTCCCCGGGCAACTCCAAAAGCCACCACTTCCTTCTCTTCCAAACAACACAAGCACA
TCGACTACACGCGCGCGTTGGACGCAACGCAGCTGTATCTCAACGAAATCGGTTTCTCGCCCCTGTTGACGCCCGAAGAG
GAAGTCCACTTCGCTCGTCTGGCGCAGAAGGGCGATCCCGCTGGTCGGAAGCGGATGATCGAGAGCAACCTGCGGTTGGT
GGTGAAGATCGCCCGGCGCTATGTCAATCGCGGACTGTCCCTGCTCGACCTGATCGAGGAAGGCAACCTAGGCCTGATCC
GCGCCGTGGAGAAGTTCGATCCGGAGCGCGGATTCCGGTTCTCGACCTACGCCACCTGGTGGATCCGCCAGACCATCGAG
CGGGCCATCATGAACCAGACCCGGACCATTCGCTTGCCGATCCATGTGGTCAAGGAGCTCAACGTCTACCTGCGTGCGGC
GCGGGAACTGACCCACAAGCTCGACCACGAACCTTCACCCGAAGAAATCGCCAACCTGCTGGAGAAGCCGGTCGCCGAGG
TCAAGCGCATGCTCGGCCTGAACGAACGGGTGACTTCGGTGGACGTCTCTCTTGGTCCGGACTCGGACAAGACCCTGCTG
GATACGCTCACCGACGATCGCCCCACCGACCCGTGCGAGCTGCTGCAGGATGACGATCTCAGCGAAAGCATCGACCAGTG
GCTGACGGAACTCACCGACAAGCAGCGTGAGGTGGTGATTCGCCGCTTCGGCTTGCGCGGGCACGAAAGCAGCACGCTGG
AAGAGGTCGGCCAGGAAATCGGCCTGACCCGCGAGCGGGTTCGTCAGATCCAGGTCGAGGCGCTGAAGCGCCTGCGGGAG
ATTCTGGAGAAGAATGGCCTGTCGAGTGACGCGCTGTTCCAGTGA

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (179-253)

• Sigma-70 region 2 (Sigma70_r2) (99-168)

• Sigma-70, region 4 (Sigma70_r4) (267-320)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (61-94)

3D structure

• AlphaFold DB: A0A0H2ZEU1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	66.463	98.204	0.653