Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MHI27_RS26430 Genome accession   NZ_CP150297
Coordinates   5959285..5961042 (+) Length   585 a.a.
NCBI ID   WP_405175026.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL H8-0261     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5954285..5966042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI27_RS26400 (MHI27_26355) - 5954367..5954942 (+) 576 WP_405175023.1 class I SAM-dependent methyltransferase -
  MHI27_RS26405 (MHI27_26360) - 5954962..5955642 (+) 681 WP_405175024.1 response regulator transcription factor -
  MHI27_RS26410 (MHI27_26365) - 5955647..5956726 (+) 1080 WP_405176802.1 sensor histidine kinase -
  MHI27_RS26415 (MHI27_26370) - 5956888..5957559 (+) 672 WP_076285307.1 response regulator transcription factor -
  MHI27_RS26420 (MHI27_26375) - 5957556..5958635 (+) 1080 WP_405175025.1 ATP-binding protein -
  MHI27_RS26425 (MHI27_26380) - 5958632..5959117 (+) 486 WP_339798572.1 GNAT family N-acetyltransferase -
  MHI27_RS26430 (MHI27_26385) rcrP 5959285..5961042 (+) 1758 WP_405175026.1 ABC transporter ATP-binding protein Regulator
  MHI27_RS26435 (MHI27_26390) rcrQ 5961042..5962802 (+) 1761 WP_405175027.1 ABC transporter ATP-binding protein Regulator
  MHI27_RS26440 (MHI27_26395) - 5962875..5963663 (-) 789 WP_042194519.1 RNA methyltransferase -
  MHI27_RS26445 (MHI27_26400) - 5963761..5964420 (-) 660 WP_076285312.1 TrkA family potassium uptake protein -
  MHI27_RS26450 (MHI27_26405) - 5964557..5964793 (+) 237 WP_042130985.1 small acid-soluble spore protein SspI -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64437.85 Da        Isoelectric Point: 5.0775

>NTDB_id=969875 MHI27_RS26430 WP_405175026.1 5959285..5961042(+) (rcrP) [Paenibacillus sp. FSL H8-0261]
MLKLLKNLEPKEWFLFGISLMFIIAQVWLDLELPDYMSDITRLIQTPGSEMNEILVAGGWMLLCALGSLATSVVVAGIAA
RIAADLSARLRSKLFDKVQSFSMEEISNFSTASLITRSTNDITQVQMLIVIGLQLLVKAPILAVWAILKISGKSWEWTLT
TGAAVALLVVIVAVCIVLVLPKFKKLQLLTDNLNRVSRENLNGLRVIRAYNAEEYQEQKFAVANNELTSTNLFANNVMTL
LMPSITLIMSGLSLSIYWVGAVLIQAAEGTAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILLPRAQVSAKRINEVLETV
PSLKNGSVTQFPVKREDEIEFKGVSFKYPDAEEYVLENISFTAKQGETVAFIGSTGCGKSTLVNLIPRFYDATEGEVLVN
GINVREYDQQALRNKMGYVSQKAVLFGGTVSSNIAFGENGSGQVLSSDIVDAVYTSQSSEFVEKLEGNYDAHIAQGGTNL
SGGQKQRLSIARAIARRPEILIFDDSFSALDYKTDRKLRSELKKDAHDSTMLIVAQRIGTIKDADKIIVLEAGRIAGMGT
HDELIQSCDVYQEIAYSQLTKEELA

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=969875 MHI27_RS26430 WP_405175026.1 5959285..5961042(+) (rcrP) [Paenibacillus sp. FSL H8-0261]
ATGTTGAAATTACTCAAGAATCTGGAACCCAAAGAATGGTTCTTATTCGGTATCAGTCTCATGTTCATTATCGCTCAAGT
CTGGCTGGATTTAGAACTGCCTGACTACATGAGTGATATTACCCGGCTGATCCAGACACCAGGAAGCGAAATGAATGAAA
TCCTTGTCGCAGGCGGTTGGATGCTGCTCTGTGCTCTTGGCAGTCTGGCGACCTCGGTTGTTGTAGCGGGCATTGCTGCG
AGAATAGCGGCCGATTTGTCTGCAAGACTGCGTTCCAAATTGTTCGATAAGGTGCAGTCCTTCTCCATGGAGGAGATCAG
CAACTTCTCAACGGCCAGTCTAATTACCCGTTCCACGAATGACATCACGCAAGTACAAATGCTGATTGTGATCGGCTTAC
AGCTACTTGTGAAAGCACCCATCCTCGCAGTGTGGGCGATACTCAAGATTTCCGGCAAAAGCTGGGAATGGACTCTTACG
ACAGGTGCCGCGGTCGCATTGCTAGTAGTTATTGTCGCAGTCTGTATCGTGCTCGTCCTGCCTAAATTTAAAAAGCTGCA
GCTGCTTACAGATAATCTGAATCGTGTATCCAGAGAGAATCTTAACGGTCTTCGTGTCATCCGGGCGTATAATGCCGAGG
AATATCAAGAACAGAAGTTCGCTGTAGCTAACAACGAGCTTACCAGTACCAACCTATTTGCCAACAATGTAATGACCCTA
TTGATGCCGAGTATTACTTTGATTATGAGTGGACTCAGTCTCTCCATCTATTGGGTGGGTGCAGTGCTCATTCAAGCAGC
CGAGGGTACTGCCAAGATGGGCTTGTTCTCAGATATGATCGTATTCTCATCTTATGCCATGCAAGTGGTTATGGCCTTTA
TGATGCTGATTATGATCTTTATTCTACTGCCCCGTGCTCAAGTATCGGCTAAACGTATCAATGAAGTGCTAGAAACAGTA
CCTAGCTTGAAGAATGGATCAGTAACTCAATTCCCTGTGAAGCGAGAAGATGAGATTGAATTCAAGGGGGTTAGCTTCAA
ATATCCAGATGCAGAGGAATATGTGTTGGAGAACATCAGCTTCACGGCGAAGCAGGGGGAGACGGTTGCTTTTATCGGAT
CTACAGGCTGCGGGAAAAGTACACTTGTTAACCTCATTCCCCGTTTCTATGATGCTACAGAAGGCGAAGTGCTGGTAAAT
GGTATCAATGTCAGAGAATACGACCAGCAAGCGCTGCGGAATAAAATGGGCTATGTCTCTCAGAAGGCTGTTCTATTTGG
CGGAACAGTGTCCTCCAATATTGCATTTGGTGAGAACGGATCCGGTCAGGTCCTCAGTTCAGATATTGTAGATGCGGTGT
ACACTTCCCAATCCTCTGAATTTGTAGAAAAGCTAGAGGGGAACTATGATGCCCATATCGCCCAAGGCGGTACGAATCTG
TCTGGCGGGCAAAAACAGCGGCTGTCGATTGCCAGAGCGATTGCCCGGCGTCCAGAAATATTAATCTTTGACGATTCTTT
CTCCGCGCTTGACTATAAGACTGACCGTAAACTGCGCAGTGAGCTTAAGAAAGACGCGCATGATTCAACGATGCTGATCG
TTGCGCAGCGTATTGGTACGATTAAAGATGCCGACAAGATCATTGTGCTGGAAGCCGGACGAATCGCAGGCATGGGAACC
CATGACGAACTAATTCAGTCCTGCGACGTCTATCAGGAAATTGCTTATTCTCAGCTTACAAAGGAGGAGCTTGCATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-293)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.349

100

0.533

Multiple sequence alignment