Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHI27_RS06385 Genome accession   NZ_CP150297
Coordinates   1448705..1449652 (+) Length   315 a.a.
NCBI ID   WP_042125010.1    Uniprot ID   A0A089IDW0
Organism   Paenibacillus sp. FSL H8-0261     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1443705..1454652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI27_RS06360 (MHI27_06355) - 1444999..1446093 (-) 1095 WP_076284112.1 Xaa-Pro peptidase family protein -
  MHI27_RS06365 (MHI27_06360) - 1446386..1447270 (+) 885 WP_283910637.1 SDR family oxidoreductase -
  MHI27_RS06370 (MHI27_06365) - 1447254..1447757 (+) 504 WP_076284114.1 GNAT family N-acetyltransferase -
  MHI27_RS06375 (MHI27_06370) - 1447776..1448120 (-) 345 WP_042185654.1 helix-turn-helix domain-containing protein -
  MHI27_RS06380 (MHI27_06375) - 1448230..1448472 (+) 243 WP_143759304.1 YqkE family protein -
  MHI27_RS06385 (MHI27_06380) ceuB 1448705..1449652 (+) 948 WP_042125010.1 ABC transporter permease Machinery gene
  MHI27_RS06390 (MHI27_06385) - 1449655..1450599 (+) 945 WP_405175854.1 iron chelate uptake ABC transporter family permease subunit -
  MHI27_RS06395 (MHI27_06390) - 1450593..1451348 (+) 756 WP_042185659.1 ABC transporter ATP-binding protein -
  MHI27_RS06400 (MHI27_06395) - 1451471..1452463 (+) 993 WP_269321807.1 siderophore ABC transporter substrate-binding protein -
  MHI27_RS06405 (MHI27_06400) - 1452661..1453164 (+) 504 WP_042185661.1 sigma-70 family RNA polymerase sigma factor -
  MHI27_RS06410 (MHI27_06405) - 1453157..1454350 (+) 1194 WP_405175855.1 anti-sigma factor -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34515.72 Da        Isoelectric Point: 10.0524

>NTDB_id=969860 MHI27_RS06385 WP_042125010.1 1448705..1449652(+) (ceuB) [Paenibacillus sp. FSL H8-0261]
MKLKYLSLLLIVFSFISLFIGVKDISPLDLFSLTESQMQTLLVSRIPRLAALIIAGVSMSIAGLIMQQLSRNKFVSPTTA
GTMDSAKFGILVSLMLFTGATPMQKLLVAFVFALLGTFIFMRILDRIKFKDSIFIPLVGLMFGNIVGSITTFFAYKNDLV
QNISSWMLGDFSTIIKGQYELIYISIPLVILAYVFANKFTVAGMGEDFSVNLGMNYKAVVNVGLVIVALISSVVILTVGT
IPFLGLVVPNIVTLYIGDNLKKNLAHTAILGAVFLLFCDILGRLIIYPYEISISLTVGVIGSGLFIYLLMRRKAN

Nucleotide


Download         Length: 948 bp        

>NTDB_id=969860 MHI27_RS06385 WP_042125010.1 1448705..1449652(+) (ceuB) [Paenibacillus sp. FSL H8-0261]
ATGAAACTAAAATATTTGTCCCTACTTCTAATAGTATTCTCATTTATATCTTTGTTTATAGGCGTAAAAGACATTTCACC
TTTGGATCTTTTTTCGCTTACAGAATCTCAGATGCAGACTCTGCTAGTCAGCCGGATTCCACGCTTAGCTGCACTGATTA
TAGCTGGTGTAAGCATGAGTATTGCCGGATTAATTATGCAGCAATTATCACGAAATAAATTCGTTTCTCCCACTACGGCG
GGCACGATGGATTCCGCGAAATTCGGTATTCTCGTGTCCCTGATGCTGTTCACAGGGGCGACACCGATGCAGAAGCTGCT
CGTTGCTTTTGTTTTTGCCCTACTGGGAACATTTATATTTATGAGAATCTTAGATCGGATCAAGTTCAAGGATAGTATTT
TTATCCCCCTGGTCGGACTCATGTTCGGGAACATTGTAGGCTCGATTACTACATTTTTTGCTTACAAAAATGATTTGGTT
CAGAATATCTCGTCTTGGATGCTTGGCGATTTCTCAACGATTATTAAGGGTCAATACGAATTAATCTATATCAGTATCCC
ACTTGTCATTCTTGCGTATGTTTTCGCCAATAAGTTCACCGTTGCCGGTATGGGGGAGGATTTCTCCGTCAATCTCGGTA
TGAACTACAAAGCGGTAGTGAACGTAGGATTGGTGATTGTAGCGTTAATCTCTTCTGTTGTTATTTTAACCGTAGGTACG
ATTCCATTCCTGGGTCTTGTTGTACCTAACATAGTAACGCTATACATAGGCGACAACTTGAAAAAAAATCTGGCGCATAC
TGCCATTCTCGGTGCGGTGTTCCTCCTGTTCTGTGATATTCTGGGCAGGCTCATTATATATCCATACGAAATATCCATCA
GTCTCACGGTAGGCGTCATCGGAAGTGGTCTATTTATCTACTTGCTGATGAGAAGAAAGGCGAATTAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A089IDW0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

56.051

99.683

0.559

Multiple sequence alignment