Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACJWMD_RS07565 Genome accession   NZ_CP177182
Coordinates   1604856..1605662 (-) Length   268 a.a.
NCBI ID   WP_004183057.1    Uniprot ID   -
Organism   Streptococcus salivarius strain MRD6060     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1599856..1610662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJWMD_RS07535 - 1600614..1601192 (-) 579 WP_004183046.1 HD domain-containing protein -
  ACJWMD_RS07540 - 1601209..1601865 (-) 657 WP_004183048.1 glucosaminidase domain-containing protein -
  ACJWMD_RS07545 - 1601956..1602297 (-) 342 WP_004183050.1 P-II family nitrogen regulator -
  ACJWMD_RS07550 - 1602308..1603543 (-) 1236 WP_004183052.1 ammonium transporter -
  ACJWMD_RS07555 rsmI 1603680..1604546 (-) 867 WP_004183053.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACJWMD_RS07560 yabA 1604549..1604869 (-) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  ACJWMD_RS07565 yaaT 1604856..1605662 (-) 807 WP_004183057.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  ACJWMD_RS07570 - 1605659..1606534 (-) 876 WP_004183058.1 DNA polymerase III subunit delta' -
  ACJWMD_RS07575 tmk 1606543..1607172 (-) 630 WP_004183060.1 dTMP kinase -
  ACJWMD_RS07585 recP/tkt 1607482..1609467 (-) 1986 WP_004183062.1 transketolase Machinery gene
  ACJWMD_RS07590 tpiA 1609733..1610491 (-) 759 WP_002890214.1 triose-phosphate isomerase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29732.16 Da        Isoelectric Point: 4.6456

>NTDB_id=969855 ACJWMD_RS07565 WP_004183057.1 1604856..1605662(-) (yaaT) [Streptococcus salivarius strain MRD6060]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPELSLPADLNRVEGLAGEKDFARYDENLLK
AEKSMGVVADLIAQNQLEMKVVDIVFPLNCSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDDIETKDGTGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=969855 ACJWMD_RS07565 WP_004183057.1 1604856..1605662(-) (yaaT) [Streptococcus salivarius strain MRD6060]
ATGACAGAAGTCATTGGAATAAAATTTGAAGAAACTGGAGCAGTAGAATACGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAACGCCTAGCTCAGGTTGTCATGGAAAACACAGATTTTCCTGAGCTTA
GTTTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGGGAGAAAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAAAAGAGTATGGGAGTAGTAGCTGATTTAATTGCTCAAAATCAGCTAGAAATGAAGGTGGTTGATATTGTCTTTCC
GCTAAATTGCTCTTATGTACTAATCAGTTTTGTTGCTGAAAAACGGGTAGATTTTCGTCAATTGCTCAAAGATCTGGCTT
CTTACTTTAAGACACGTATTGAGTTGCGCCAAATTTCGAGTCGTGAGGAATCAAAGATTTATGGTGGCCTAGGACCTTGT
GGCCGAGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCAATTAAGATGGCTAAAAACCAAAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCTAGTTATCCTGACTTGGGTGATGACATTGAAACCAAGGATGGCACAGGTCAGGTCGTTGCCATTGATGTAATT
GCAGGGACCATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.948

99.627

0.418