Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ACJWMD_RS05300 Genome accession   NZ_CP177182
Coordinates   1150600..1151082 (-) Length   160 a.a.
NCBI ID   WP_004182600.1    Uniprot ID   -
Organism   Streptococcus salivarius strain MRD6060     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1145600..1156082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJWMD_RS05285 lepB 1147514..1148071 (-) 558 WP_004182597.1 signal peptidase I -
  ACJWMD_RS05290 - 1148193..1149422 (-) 1230 WP_004182598.1 tetratricopeptide repeat protein -
  ACJWMD_RS05295 - 1149412..1150590 (-) 1179 WP_004182599.1 AI-2E family transporter -
  ACJWMD_RS05300 mutX 1150600..1151082 (-) 483 WP_004182600.1 NUDIX hydrolase Machinery gene
  ACJWMD_RS05305 ftsX 1151237..1152166 (-) 930 WP_003092823.1 permease-like cell division protein FtsX -
  ACJWMD_RS05310 ftsE 1152159..1152851 (-) 693 WP_002885005.1 cell division ATP-binding protein FtsE -
  ACJWMD_RS05320 queG 1154090..1155208 (-) 1119 WP_004182601.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18821.17 Da        Isoelectric Point: 4.4433

>NTDB_id=969834 ACJWMD_RS05300 WP_004182600.1 1150600..1151082(-) (mutX) [Streptococcus salivarius strain MRD6060]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDRPFFSAKFVYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=969834 ACJWMD_RS05300 WP_004182600.1 1150600..1151082(-) (mutX) [Streptococcus salivarius strain MRD6060]
ATGACAAAGTTAGCCACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCCGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCATATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTATGAGATCTTCAAGTGGATCCTTGAAG
ATAGACCTTTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAATTTAGTAGACAAGACTGTAACTTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.327

99.375

0.719