Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   ACJWMC_RS10470 Genome accession   NZ_CP177181
Coordinates   2206158..2206931 (+) Length   257 a.a.
NCBI ID   WP_002889563.1    Uniprot ID   J7SI19
Organism   Streptococcus salivarius strain MRD1919     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2201158..2211931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJWMC_RS10450 mreD 2201606..2202130 (+) 525 WP_002889558.1 rod shape-determining protein MreD -
  ACJWMC_RS10455 - 2202215..2203726 (+) 1512 WP_002889559.1 CHAP domain-containing protein -
  ACJWMC_RS10460 - 2203938..2204903 (+) 966 WP_002886286.1 ribose-phosphate diphosphokinase -
  ACJWMC_RS10465 - 2204996..2206171 (+) 1176 WP_037597269.1 pyridoxal phosphate-dependent aminotransferase -
  ACJWMC_RS10470 recO 2206158..2206931 (+) 774 WP_002889563.1 DNA repair protein RecO Machinery gene
  ACJWMC_RS10475 plsX 2207143..2208147 (+) 1005 WP_013989885.1 phosphate acyltransferase PlsX -
  ACJWMC_RS10480 - 2208147..2208392 (+) 246 WP_002889565.1 phosphopantetheine-binding protein -
  ACJWMC_RS10485 purC 2208646..2209353 (+) 708 WP_002889566.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29775.96 Da        Isoelectric Point: 4.9437

>NTDB_id=969773 ACJWMC_RS10470 WP_002889563.1 2206158..2206931(+) (recO) [Streptococcus salivarius strain MRD1919]
MQKLESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGAGKLSAVIQPLTIAEFMMTVNDEGLSFIEDYSQAQSFKE
ITSDIFKLSYATYLAALTDATIADGVTDAQLFVFLEKTLELMEEGLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGL
PFDFSFKFSGLLCPNHYAEDERRSHLDPNVPYLLDRFQGLSFEELRSISVKDDMKRKLRYFIDDLYDNYVGIHLKSKKFI
DNLNSWGHIMNKEDSAD

Nucleotide


Download         Length: 774 bp        

>NTDB_id=969773 ACJWMC_RS10470 WP_002889563.1 2206158..2206931(+) (recO) [Streptococcus salivarius strain MRD1919]
ATGCAGAAGCTTGAGAGTAGAGGGCTTGTCCTCTTCAATCGTAATTATCGTGAGAATGATAAACTAGTTAAAATTTTTAC
CGAGCAAGCTGGTAAACGGATGTTTTTTGTTAGAGGTGGTGGGGCAGGTAAATTAAGTGCTGTCATTCAACCTTTGACCA
TCGCTGAATTCATGATGACTGTAAATGATGAAGGTCTATCTTTCATAGAAGATTATAGCCAGGCACAATCCTTCAAGGAA
ATTACAAGCGATATTTTCAAGCTGTCTTATGCGACTTATTTGGCTGCATTGACAGATGCTACTATTGCTGATGGTGTGAC
AGATGCGCAATTATTTGTATTCTTGGAGAAGACGCTTGAATTAATGGAAGAAGGCTTGGATTATGAAATCTTGACTAATA
TCTTTGAGATTCAGGTTTTAGACCGTTTCGGCGTACGCTTGAATTTTCACGAGTGTGTCTTTTGTCATCGTGTAGGACTT
CCTTTTGATTTCTCGTTTAAGTTCTCGGGGCTACTTTGTCCAAATCACTATGCAGAGGATGAAAGGCGTAGTCACTTGGA
CCCTAATGTGCCTTATCTTTTAGATCGTTTTCAGGGGCTTTCCTTTGAAGAATTGAGAAGCATATCTGTTAAGGATGACA
TGAAACGAAAGCTACGATATTTTATCGATGACCTCTATGATAATTATGTTGGAATACATCTTAAAAGTAAGAAGTTTATT
GATAATCTAAATTCTTGGGGCCATATTATGAATAAAGAAGATAGTGCTGACTAG

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-77)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7SI19

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

62.846

98.444

0.619

Multiple sequence alignment