Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSQ62_RS19480 Genome accession   NZ_CP150291
Coordinates   3891810..3892766 (-) Length   318 a.a.
NCBI ID   WP_341321708.1    Uniprot ID   -
Organism   Solibacillus sp. FSL H8-0523     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3886810..3897766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ62_RS19455 (NSQ62_19455) - 3887540..3888151 (-) 612 WP_341321703.1 phosphatase PAP2 family protein -
  NSQ62_RS19460 (NSQ62_19460) - 3888475..3888807 (-) 333 WP_341321704.1 antibiotic biosynthesis monooxygenase -
  NSQ62_RS19465 (NSQ62_19465) - 3888869..3889921 (-) 1053 WP_341321705.1 siderophore ABC transporter substrate-binding protein -
  NSQ62_RS19470 (NSQ62_19470) - 3890103..3890870 (-) 768 WP_341321706.1 ATP-binding cassette domain-containing protein -
  NSQ62_RS19475 (NSQ62_19475) - 3890867..3891823 (-) 957 WP_341321707.1 iron chelate uptake ABC transporter family permease subunit -
  NSQ62_RS19480 (NSQ62_19480) ceuB 3891810..3892766 (-) 957 WP_341321708.1 ABC transporter permease Machinery gene
  NSQ62_RS19485 (NSQ62_19485) menC 3893025..3894134 (-) 1110 WP_341321709.1 o-succinylbenzoate synthase -
  NSQ62_RS19490 (NSQ62_19490) - 3894147..3894980 (-) 834 WP_341321710.1 GNAT family N-acetyltransferase -
  NSQ62_RS19495 (NSQ62_19495) - 3894940..3896118 (-) 1179 WP_341321711.1 M20 peptidase aminoacylase family protein -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34838.05 Da        Isoelectric Point: 9.5449

>NTDB_id=969712 NSQ62_RS19480 WP_341321708.1 3891810..3892766(-) (ceuB) [Solibacillus sp. FSL H8-0523]
MRLWMLVVATIILSFVSLFIGAIDIKPSDLLDWDSDKTQIFLMSRVPRLMAILLAGAGMGISGLIMQSLSRNKFVSPTTS
GTLDAAKLGIVVSMVFFTSVGYMEKILFSFAFALIGMMIFMRLLESIKFKDVIFVPLIGIMYGNIIGAISTFIAYEADVM
QSVDTFFLGSFTLVVSGRYELLYVAVPAILLAYLYANKFTVAGMGEDFAKNLGLSYRTVLNLGLVLVALISTTVVLTVGI
IPFLGLIVPNLVSLYMGDNLRKTIPHTIFLGAAFLLFCDIISRIIVYPFEIPVNTTVAVIGSAIFLVMLFRGKAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=969712 NSQ62_RS19480 WP_341321708.1 3891810..3892766(-) (ceuB) [Solibacillus sp. FSL H8-0523]
ATGAGACTTTGGATGCTTGTTGTAGCAACCATCATCTTGTCCTTTGTATCACTATTTATCGGAGCAATCGACATTAAGCC
GTCTGATTTATTGGACTGGGATTCAGATAAGACACAAATTTTCTTAATGAGTCGAGTGCCGCGATTAATGGCGATTTTAC
TTGCTGGGGCAGGGATGGGGATTTCAGGTTTAATTATGCAAAGCTTAAGTCGTAACAAGTTTGTATCACCGACAACTTCA
GGTACGCTTGACGCAGCGAAGCTAGGGATTGTTGTATCAATGGTGTTTTTTACAAGTGTAGGCTATATGGAGAAAATCCT
ATTTAGTTTTGCTTTTGCTTTAATTGGTATGATGATTTTCATGCGTCTTCTTGAAAGTATTAAATTCAAGGACGTTATTT
TTGTGCCGTTAATTGGGATTATGTACGGTAATATTATCGGCGCGATTTCTACGTTTATTGCGTATGAAGCCGATGTCATG
CAAAGCGTGGATACATTCTTCTTAGGAAGCTTTACGCTTGTTGTTTCAGGACGTTACGAGTTACTATACGTAGCAGTGCC
TGCCATTTTATTAGCGTATTTATATGCGAATAAATTTACGGTTGCCGGCATGGGTGAAGATTTCGCCAAAAATTTAGGGC
TAAGCTATCGTACGGTGTTAAATCTAGGCTTAGTGCTCGTCGCGCTTATTTCTACAACCGTTGTATTAACGGTCGGGATT
ATTCCGTTCTTAGGATTAATCGTGCCGAACTTAGTTTCGTTATATATGGGCGACAATTTACGTAAAACAATTCCACATAC
GATTTTCTTAGGGGCCGCGTTCCTATTATTCTGTGACATTATTAGCCGTATTATTGTGTATCCATTTGAAATTCCAGTGA
ATACGACCGTTGCTGTAATCGGCAGTGCGATCTTCTTAGTCATGTTATTTAGGGGGAAAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

99.371

0.5

Multiple sequence alignment