Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACJVG6_RS07290 Genome accession   NZ_CP177180
Coordinates   1555037..1556773 (-) Length   578 a.a.
NCBI ID   WP_004182993.1    Uniprot ID   -
Organism   Streptococcus salivarius strain MRD-KRBY     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1550037..1561773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVG6_RS07275 queA 1550678..1551721 (+) 1044 WP_004182990.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  ACJVG6_RS07280 - 1551946..1553195 (+) 1250 Protein_1381 ISL3 family transposase -
  ACJVG6_RS07285 rcrQ 1553237..1555024 (-) 1788 WP_004182992.1 ABC transporter ATP-binding protein Regulator
  ACJVG6_RS07290 rcrP 1555037..1556773 (-) 1737 WP_004182993.1 ABC transporter ATP-binding protein Regulator
  ACJVG6_RS07295 - 1556972..1557127 (-) 156 Protein_1384 LysR family transcriptional regulator -
  ACJVG6_RS07300 - 1557137..1558690 (-) 1554 WP_037605638.1 BCCT family transporter -
  ACJVG6_RS07305 - 1558918..1559511 (-) 594 WP_004182996.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  ACJVG6_RS07310 - 1559569..1559778 (-) 210 Protein_1387 CHAP domain-containing protein -
  ACJVG6_RS07315 - 1560208..1561389 (-) 1182 WP_004182999.1 tyrosine-type recombinase/integrase -
  ACJVG6_RS07320 - 1561379..1561639 (-) 261 WP_004183000.1 DUF3173 family protein -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64799.68 Da        Isoelectric Point: 5.4279

>NTDB_id=969616 ACJVG6_RS07290 WP_004182993.1 1555037..1556773(-) (rcrP) [Streptococcus salivarius strain MRD-KRBY]
MAYIWSYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDVDKLYAYAWVMFGVVLTGIVGRILLSYAVGKL
TTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQATLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMNADQIIVLDEGEIVGRGRHEELMESND
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=969616 ACJVG6_RS07290 WP_004182993.1 1555037..1556773(-) (rcrP) [Streptococcus salivarius strain MRD-KRBY]
ATGGCTTATATTTGGTCTTATCTCAGACGTTATCCCAAGTGGCTAGCAATGAATTTTACGGCAGCCATTTTATTTGTTAT
TGCTAACTTGGGTTTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATAAACCGTGGTGATGTTGATAAGCTTTACG
CTTATGCTTGGGTCATGTTTGGTGTAGTTTTGACTGGGATTGTTGGTCGTATACTTCTGTCCTATGCGGTTGGTAAATTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCCCACCATGAGTATGAGCAGAT
TGGGGTATCTTCTTTGGTGACTCGTATCACGTCGGATGCCTTTGTTCTCATGCAGTTTGCAGATCAGGTTCTTAAGCTAG
GGGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTTTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCA
ATCTCCTTACCTTTCCTAGCCGTAGTTGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAGCAACAGGCAAC
TCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATACGTGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAACAAACTTTTTAAATTGACTGGTTTGACCGAG
CCACTTTTTGTGCAAATCATCATAGCCATGATTGTGGCAATTGTTTGGTTTGCCCTTGAGCCATTAGGTTCCGGGACTTT
AGCTATCGGGGACTTGGTTGCCTTTATTGAGTATAGCTTCCATGCACTCTTGTCCTTCCTTTTCCTAGCCAATCTCTTTA
CCATGTATCCTCGTACAGCGGTATCTAGTGAACGTCTGCAGGAAATTATGGACATGCCGATTTCTATCAATCCAAATGAA
GATGGCGTGACAGAAACCGAGACTAAGGGATATTTGGAATTTGACAATGTGACCTTTGCCTATCCTGGTGAAACTGAAAG
TCCTGTCTTACACAATATTTCTTTCAAGGCAAAACCTGGTGAAACCATTGCCTTTATTGGATCTACGGGTTCAGGAAAAT
CGTCACTTGTACAGTTGATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTTGATGGTGTAGATGTCCGTGAC
TACAATCTTAAGGCTCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCCCTACTCTTTACAGGGACTATCGGTGAAAA
TATCCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAGGGTGGTAGCAACCTTTCTGGGGGACAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTTTATATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGCCGTCGTCTAAAAGAAGTGACTCAAGATGCGACAGTCCTGATTGTAGCCCAACGTGTGGGAACTATCATGA
ATGCTGATCAAATCATTGTTTTGGATGAAGGTGAAATCGTTGGTCGTGGCCGTCATGAAGAGCTTATGGAAAGCAATGAC
ATTTACCGTGAAATTGCTAATTCACAATTGAATCAAAAGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(17-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.662

92.042

0.365