Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACJVG6_RS07285 Genome accession   NZ_CP177180
Coordinates   1553237..1555024 (-) Length   595 a.a.
NCBI ID   WP_004182992.1    Uniprot ID   -
Organism   Streptococcus salivarius strain MRD-KRBY     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1548237..1560024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVG6_RS07260 - 1548321..1549304 (-) 984 WP_004182986.1 rhodanese-related sulfurtransferase -
  ACJVG6_RS07265 - 1549474..1549816 (-) 343 Protein_1378 DUF2200 domain-containing protein -
  ACJVG6_RS07270 - 1549825..1550526 (-) 702 WP_004182989.1 glucosamine-6-phosphate deaminase -
  ACJVG6_RS07275 queA 1550678..1551721 (+) 1044 WP_004182990.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  ACJVG6_RS07280 - 1551946..1553195 (+) 1250 Protein_1381 ISL3 family transposase -
  ACJVG6_RS07285 rcrQ 1553237..1555024 (-) 1788 WP_004182992.1 ABC transporter ATP-binding protein Regulator
  ACJVG6_RS07290 rcrP 1555037..1556773 (-) 1737 WP_004182993.1 ABC transporter ATP-binding protein Regulator
  ACJVG6_RS07295 - 1556972..1557127 (-) 156 Protein_1384 LysR family transcriptional regulator -
  ACJVG6_RS07300 - 1557137..1558690 (-) 1554 WP_037605638.1 BCCT family transporter -
  ACJVG6_RS07305 - 1558918..1559511 (-) 594 WP_004182996.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  ACJVG6_RS07310 - 1559569..1559778 (-) 210 Protein_1387 CHAP domain-containing protein -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66497.53 Da        Isoelectric Point: 5.1404

>NTDB_id=969615 ACJVG6_RS07285 WP_004182992.1 1553237..1555024(-) (rcrQ) [Streptococcus salivarius strain MRD-KRBY]
MKNNKKKTNHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLDIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTDKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQIV
NAVFTLVLVIGTVLYLNLQLGAIVVVTIPITFFGAHFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=969615 ACJVG6_RS07285 WP_004182992.1 1553237..1555024(-) (rcrQ) [Streptococcus salivarius strain MRD-KRBY]
ATGAAGAATAATAAAAAGAAAACAAATCATTCCTCAAGTTTTGGCCGTCTTTGGTCATACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCTATTTTCCTGAAAATTGTTAGTGTCATCATGAGTGTCCTTGAACCCGTAGTCATTGGTTTAGCTATTA
CAGAGTTGACTAAAAATACGCTGGATATCATTAAGGGGGTAGAAGGCGCCCATATCAATGTATCCTATGTTGGTTTGGTT
CTAGTTGTTTATCTCTTGCGTGGTCTCATTTATGAGTTGGCTGCCTACTATTCCAACTATTTCATGACCAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACCGATAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TTGGGGACCTCTTGGGCCGCTTTACTAGTGACGTTGAGACAGTATCTAATGCCTTGCAGCAGTCATTCTTGCAGATTGTT
AATGCCGTCTTTACTCTAGTCTTAGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCGTCAC
TATTCCCATTACTTTCTTTGGTGCTCACTTCATTATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGCTTCAATGTGCTTAAGCTATTTGGCCGTGAGGATAGATCCTTG
GACGATTTTAAAGAAATCACGGAAGACCTTCAGAAGGTAGGCTTTAAGGCTAATTTCATTTCAGGCCTCATGATGCCTGT
CCTTAATGGTTTATCTGACTTGACCTATCTCATTGTCGCTGTTCTAGGTGGTTTGCAAGTTTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAGAGTGCTAAGTCTTCTTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCCAATGATGCTACTGAAGT
GCTTGAAGGAGATTTGACCGGTCAGGTTAGCTTTAAGCATGTAGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAAGTCAATCCTGGCGAAATGGTCGCCATTGTCGGCCCAACTGGTGCCGGAAAATCAACGATTATCAAT
CTTCTCATGCGTTTTTATGATGTGACGGCTGGTTCTATCTCGGTTGATGGTCATGATATTCGTAACTTATCACGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCGACTGACGAAGAAATTGTTGAAGCTGCTAAGGCGGCCAATGTGGATCACTTTATCCGTACATTACCTGGC
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATCTCACTAGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGACGAGGCGACCTCATCGGTTGATACCCGTCTGGAACTCCTGATTCAAAAAG
CCATGAAGACCCTTATGCAAGGTCGAACAAGCTTTGTCATTGCCCACCGTCTATCGACCATTCAAGAAGCAGACAAAATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGCTTCTATTACGACTT
GTATAATAGCCAGTTTGCGGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.546

100

0.427