Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MHH64_RS10145 Genome accession   NZ_CP150287
Coordinates   2022475..2024286 (+) Length   603 a.a.
NCBI ID   WP_340003181.1    Uniprot ID   -
Organism   Oceanobacillus sp. FSL K6-0127     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 2017475..2029286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH64_RS10125 (MHH64_10125) - 2018021..2018422 (+) 402 WP_340003178.1 thiol-disulfide oxidoreductase DCC family protein -
  MHH64_RS10130 (MHH64_10130) mecA 2018880..2019572 (+) 693 WP_095309492.1 adaptor protein MecA -
  MHH64_RS10135 (MHH64_10135) - 2019719..2021011 (+) 1293 WP_340003179.1 DUF5068 domain-containing protein -
  MHH64_RS10140 (MHH64_10140) - 2021187..2022380 (+) 1194 WP_340003180.1 competence protein CoiA family protein -
  MHH64_RS10145 (MHH64_10145) pepF 2022475..2024286 (+) 1812 WP_340003181.1 oligoendopeptidase F Regulator
  MHH64_RS10150 (MHH64_10150) - 2024334..2024519 (-) 186 WP_095309486.1 hypothetical protein -
  MHH64_RS10155 (MHH64_10155) - 2024905..2025798 (-) 894 WP_095309484.1 ClpXP adapter SpxH family protein -
  MHH64_RS10160 (MHH64_10160) - 2025817..2026203 (-) 387 WP_095309482.1 globin -
  MHH64_RS10165 (MHH64_10165) - 2026288..2026860 (-) 573 WP_118888747.1 CYTH domain-containing protein -
  MHH64_RS10170 (MHH64_10170) - 2027088..2027696 (+) 609 WP_118888748.1 GTP pyrophosphokinase family protein -
  MHH64_RS10175 (MHH64_10175) - 2027797..2028606 (+) 810 WP_095309476.1 NAD kinase -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 69569.02 Da        Isoelectric Point: 4.6440

>NTDB_id=969601 MHH64_RS10145 WP_340003181.1 2022475..2024286(+) (pepF) [Oceanobacillus sp. FSL K6-0127]
MAKTTKELPKRSDIPVESTWRLEDIFATDELWQEELKKLQNDIPKAEAYKGKLSESPDALYDLLKLQDELFERLGKLYTY
SHMRYDQDTTNSFYQGLNAQADMVLTQASSVMSYIVPEVLQMDEAKIKQFLEEKEELNFYKKVLDEINRGRPHALSEKEE
ALLAEASEPLSSSSQTFGMLNNADLTFPSIINENGEEVDLTHGRYSTFLESKDRRVREDAFTKVYDTYGNFKNTFASTLS
GAVKTHNFSAKVRNYESARQAALDNNNIPEQVYDNLVEAVNEKLPLLHRYTELRKKVLKLDELHMYDLYTPLVKEVEMKV
SYEEAKDFMFKGLSPLGSEYGEILKEAFENRWIDVEENKGKRSGAYSSGSYATNPYILMNWQDDVNNTFTLAHELGHSVH
SYYTRKTQPFRYGDYSIFVAEVASTTNEALLNDYLLNNLEDEKQKLYILNHFLEGFRGTVFRQTMFAEFEHEIHVRAKDG
EALTADKLTEIYYDLNKKYYGEAVVSDEAIGLEWARIPHFYYNYYVYQYATGYSAATALANNILEGKEGAVERYLDFLKA
GSSDYPIEVLKKAGVDMTSKQPILDALDVFEEKLNEMERMLLG

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=969601 MHH64_RS10145 WP_340003181.1 2022475..2024286(+) (pepF) [Oceanobacillus sp. FSL K6-0127]
ATGGCAAAAACGACAAAGGAATTACCAAAACGCAGTGACATACCAGTTGAATCTACATGGAGATTAGAGGATATCTTTGC
CACTGATGAATTGTGGCAGGAAGAATTAAAAAAATTGCAAAATGATATTCCAAAAGCAGAAGCATATAAAGGGAAATTAT
CAGAGTCTCCAGATGCCTTATATGATTTGTTGAAACTACAAGATGAACTTTTTGAGCGCCTTGGAAAATTATATACATAT
TCGCATATGCGATATGATCAGGATACAACCAATTCCTTTTATCAAGGCTTAAATGCTCAAGCGGATATGGTGCTAACTCA
AGCTTCAAGTGTAATGAGTTATATTGTTCCAGAAGTGCTTCAAATGGATGAGGCTAAAATTAAGCAGTTTCTTGAAGAAA
AAGAAGAACTAAATTTTTATAAAAAAGTATTGGATGAAATTAACCGCGGGCGTCCACACGCATTAAGCGAGAAAGAAGAG
GCGTTGCTCGCCGAAGCATCCGAGCCTTTATCAAGCTCTTCGCAGACATTTGGTATGCTTAATAACGCTGATTTAACCTT
TCCTTCAATTATCAACGAGAATGGGGAAGAGGTTGATCTTACACATGGAAGATACTCTACATTTTTAGAATCAAAGGATC
GTCGTGTTCGAGAAGATGCGTTCACTAAGGTATATGACACGTATGGTAATTTTAAAAATACATTTGCTTCAACACTTAGT
GGAGCAGTGAAAACCCATAATTTCTCTGCCAAAGTTCGAAATTATGAATCTGCAAGACAGGCTGCACTGGATAACAATAA
TATACCTGAACAAGTTTATGATAATTTAGTCGAGGCTGTTAATGAAAAGCTTCCATTATTGCACCGTTATACAGAGCTGC
GTAAAAAAGTATTAAAGCTTGATGAATTGCATATGTACGATTTGTACACACCTTTGGTCAAAGAAGTTGAAATGAAGGTT
TCCTATGAAGAGGCTAAAGATTTTATGTTTAAAGGGTTATCTCCACTCGGGAGTGAATATGGAGAAATTCTAAAAGAAGC
TTTTGAAAATCGCTGGATCGATGTAGAAGAGAATAAAGGAAAACGAAGCGGAGCATATTCTTCTGGATCATATGCGACAA
ATCCATATATATTGATGAACTGGCAAGATGATGTGAACAATACGTTTACATTAGCACACGAGCTAGGTCATTCTGTTCAT
AGCTACTATACAAGAAAAACCCAGCCTTTCCGCTATGGAGATTACTCCATTTTTGTAGCAGAGGTTGCATCTACGACAAA
TGAAGCATTGTTAAATGATTATTTATTAAATAATTTAGAAGATGAAAAACAAAAGCTATATATTTTAAATCATTTCTTAG
AAGGCTTCCGCGGAACGGTATTCCGTCAAACGATGTTCGCTGAATTCGAGCATGAGATCCATGTAAGAGCAAAAGACGGA
GAAGCACTTACTGCGGATAAGCTAACCGAAATCTATTATGATCTAAACAAAAAATATTATGGAGAAGCAGTTGTTTCTGA
TGAAGCAATCGGACTGGAATGGGCAAGAATTCCACATTTCTATTACAACTATTATGTATACCAGTATGCAACAGGATATT
CTGCTGCGACGGCACTTGCGAATAACATATTAGAAGGAAAAGAAGGTGCAGTTGAACGTTATCTTGATTTCCTGAAAGCT
GGAAGTAGCGATTATCCAATCGAAGTGTTGAAAAAAGCTGGGGTTGATATGACTTCAAAACAACCGATTTTAGATGCACT
TGATGTGTTTGAGGAAAAATTGAATGAAATGGAACGCATGTTATTAGGATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(118-187)

Peptidase family M3 (Peptidase_M3)

(208-587)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.085

98.01

0.491

Multiple sequence alignment