Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHB78_RS09975 Genome accession   NZ_CP150286
Coordinates   1850550..1851350 (+) Length   266 a.a.
NCBI ID   WP_046131871.1    Uniprot ID   A0AAJ3Z019
Organism   Bacillus sp. FSL K6-0138     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 1845550..1856350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB78_RS09955 (MHB78_09955) - 1845611..1846456 (+) 846 WP_046131875.1 TlyA family RNA methyltransferase -
  MHB78_RS09960 (MHB78_09960) argR 1846563..1847012 (+) 450 WP_046131874.1 transcriptional regulator ArgR -
  MHB78_RS09965 (MHB78_09965) recN 1847043..1848773 (+) 1731 WP_046131873.1 DNA repair protein RecN Machinery gene
  MHB78_RS09970 (MHB78_09970) spoIVB 1848944..1850260 (+) 1317 WP_046131872.1 SpoIVB peptidase -
  MHB78_RS09975 (MHB78_09975) spo0A 1850550..1851350 (+) 801 WP_046131871.1 sporulation transcription factor Spo0A Regulator
  MHB78_RS09980 (MHB78_09980) - 1852076..1852990 (-) 915 WP_046131869.1 class I SAM-dependent methyltransferase -
  MHB78_RS09985 (MHB78_09985) - 1853330..1854055 (+) 726 WP_046131868.1 glycerophosphodiester phosphodiesterase -
  MHB78_RS09990 (MHB78_09990) - 1854090..1854344 (-) 255 WP_046131867.1 DUF2627 domain-containing protein -

Sequence


Protein


Download         Length: 266 a.a.        Molecular weight: 29566.11 Da        Isoelectric Point: 6.6109

>NTDB_id=969549 MHB78_RS09975 WP_046131871.1 1850550..1851350(+) (spo0A) [Bacillus sp. FSL K6-0138]
MEKIKVCVADDNRELVGLLSEYIEGQNDMEVIGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDIENLVGHIRQVSGNGSQMTHRAPSVQSSVLRPQPESPKKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=969549 MHB78_RS09975 WP_046131871.1 1850550..1851350(+) (spo0A) [Bacillus sp. FSL K6-0138]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGTGAATATATCGAGGGTCAAAA
CGACATGGAAGTGATCGGCGTGGCATATAACGGACAGGAATGTCTTTCTCTGTTTAAAGACAAGGAGCCTGACGTACTCG
TACTGGATATTATCATGCCTCATCTAGACGGATTGGCCGTTTTGGAAAGGCTGCGGGAATCTCAGCTTAAAAAACAGCCG
AACGTCATTATGCTGACTGCTTTCGGTCAGGAAGACGTAACGAAAAAAGCCGTGGATTTAGGCGCATCGTACTTCATTCT
GAAGCCGTTTGATATAGAAAATCTCGTCGGTCACATCCGCCAAGTCAGCGGAAACGGTTCTCAAATGACACACCGCGCCC
CTTCGGTTCAAAGCAGCGTCCTCCGGCCGCAGCCTGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGAGCATCATC
CACGAAATCGGCGTTCCCGCCCATATTAAAGGGTACCTATACTTGAGAGAAGCCATCTCCATGGTGTATAACGATATTGA
ACTGCTCGGAAGCATTACAAAAGTGCTGTATCCGGACATCGCCAAAAAATTCAACACGACCGCAAGCCGGGTCGAACGGG
CGATCCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCCATTTCTTCTCTGTTCGGCTACACCGTCAGC
ATGTCAAAAGCAAAGCCGACGAACAGCGAATTCATCGCGATGGTCGCAGATAAGCTGCGGTTGGAGCATAAGGCTTCTTA
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.509

100

0.929


Multiple sequence alignment