Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACJVC4_RS02740 Genome accession   NZ_CP177179
Coordinates   547369..549156 (+) Length   595 a.a.
NCBI ID   WP_002890277.1    Uniprot ID   J7THD7
Organism   Streptococcus salivarius strain MRD-NRLLH     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 542369..554156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC4_RS02715 rplL 542885..543253 (+) 369 WP_004183006.1 50S ribosomal protein L7/L12 -
  ACJVC4_RS02720 - 543464..543586 (+) 123 WP_002269975.1 hypothetical protein -
  ACJVC4_RS02725 - 543703..545256 (+) 1554 WP_002890269.1 BCCT family transporter -
  ACJVC4_RS02730 - 545266..545421 (+) 156 Protein_490 LysR family transcriptional regulator -
  ACJVC4_RS02735 rcrP 545620..547356 (+) 1737 WP_002890275.1 ABC transporter ATP-binding protein Regulator
  ACJVC4_RS02740 rcrQ 547369..549156 (+) 1788 WP_002890277.1 ABC transporter ATP-binding protein Regulator
  ACJVC4_RS02745 queA 549254..550297 (-) 1044 WP_002890279.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  ACJVC4_RS02750 - 550450..551151 (+) 702 WP_037597515.1 glucosamine-6-phosphate deaminase -
  ACJVC4_RS02755 - 551341..552324 (+) 984 WP_002890288.1 rhodanese-related sulfurtransferase -
  ACJVC4_RS02760 - 552503..552700 (+) 198 WP_014621323.1 helix-turn-helix transcriptional regulator -
  ACJVC4_RS02765 - 552714..553208 (+) 495 WP_037597518.1 DUF6773 family protein -
  ACJVC4_RS02770 - 553354..554037 (+) 684 WP_002890291.1 VIT family protein -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66544.63 Da        Isoelectric Point: 5.1474

>NTDB_id=969452 ACJVC4_RS02740 WP_002890277.1 547369..549156(+) (rcrQ) [Streptococcus salivarius strain MRD-NRLLH]
MKNNKKKTNHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVIEPVVIGLAITELTKNTLDIIKEVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTDKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQIV
NAVFTLVLVIGTVLYLNLQLGAIVVVTIPITFFGARFIMSKSQPYFKQQAAALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=969452 ACJVC4_RS02740 WP_002890277.1 547369..549156(+) (rcrQ) [Streptococcus salivarius strain MRD-NRLLH]
ATGAAGAATAATAAAAAGAAAACAAATCATTCCTCAAGTTTTGGCCGTCTTTGGTCATACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCCATTTTCTTGAAAATTGTTAGTGTCATCATGAGTGTCATTGAACCCGTAGTCATTGGTTTAGCTATTA
CAGAGCTGACCAAAAATACGCTGGATATCATTAAGGAGGTAGAAGGCGCCCATATCAATGTATCCTATGTTGGTTTGGTT
CTGGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCTGCCTACTATTCCAACTATTTCATGACTAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACCGATAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAAT
TTGGGGACCTCTTGGGCCGCTTTACTAGTGACGTTGAGACAGTATCTAATGCCTTGCAGCAGTCATTCTTGCAGATTGTT
AATGCCGTCTTTACTCTAGTCTTAGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCGTCAC
TATTCCCATTACTTTCTTTGGTGCCCGTTTTATCATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGCTGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGCTTAAACTTTTTGGCCGTGAGGATAGATCTTTA
GACGACTTTAAAGAGATTACGGAAGACCTTCAGAAGGTAGGTTTTAAGGCCAATTTCATTTCAGGCCTCATGATGCCTGT
ACTTAATGGTTTATCTGACTTGACCTATCTCATTGTCGCTGTTCTAGGTGGTTTGCAAGTTTTAGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTAGCTGGACAA
TTGCAGAGTGCTAAGTCTTCTTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCCAATGATGCTACTGAAGT
GCTTGAAGGAGATTTGACCGGTCAAGTTAGCTTTAAGCATGTGGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAAGTCAATCCTGGCGAAATGGTCGCTATTGTCGGCCCAACTGGTGCCGGAAAATCAACGATTATCAAT
CTTCTCATGCGTTTCTATGATGTGACTGCAGGTTCTATCTCGGTTGATGGTCATGATATTCGTAACTTATCACGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGTTTTGGTA
ATCTTGAGGCAACTGATGAAGAAATTGTTGAAGCCGCTAAGGCTGCCAATGTGGACCACTTTATCCGTACGCTACCTGGC
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGACGAGGCAACCTCATCAGTTGATACCCGTTTGGAACTCTTGATTCAAAAGG
CTATGAAGACTCTCATGCAGGGTCGAACAAGCTTTGTCATTGCTCACCGTCTGTCAACTATCCAAGAGGCAGACAAGATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTTCTTGCAGATAAAGGCTTCTATTACGATTT
GTATAATAGCCAGTTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-310)

ABC transporter (ABC_tran)

(373-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7THD7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.379

100

0.425