Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACJVC4_RS02735 Genome accession   NZ_CP177179
Coordinates   545620..547356 (+) Length   578 a.a.
NCBI ID   WP_002890275.1    Uniprot ID   J7T6G1
Organism   Streptococcus salivarius strain MRD-NRLLH     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 540620..552356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC4_RS02705 - 540809..542017 (+) 1209 WP_002890265.1 ABC transporter permease -
  ACJVC4_RS02710 rplJ 542307..542810 (+) 504 WP_003095623.1 50S ribosomal protein L10 -
  ACJVC4_RS02715 rplL 542885..543253 (+) 369 WP_004183006.1 50S ribosomal protein L7/L12 -
  ACJVC4_RS02720 - 543464..543586 (+) 123 WP_002269975.1 hypothetical protein -
  ACJVC4_RS02725 - 543703..545256 (+) 1554 WP_002890269.1 BCCT family transporter -
  ACJVC4_RS02730 - 545266..545421 (+) 156 Protein_490 LysR family transcriptional regulator -
  ACJVC4_RS02735 rcrP 545620..547356 (+) 1737 WP_002890275.1 ABC transporter ATP-binding protein Regulator
  ACJVC4_RS02740 rcrQ 547369..549156 (+) 1788 WP_002890277.1 ABC transporter ATP-binding protein Regulator
  ACJVC4_RS02745 queA 549254..550297 (-) 1044 WP_002890279.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  ACJVC4_RS02750 - 550450..551151 (+) 702 WP_037597515.1 glucosamine-6-phosphate deaminase -
  ACJVC4_RS02755 - 551341..552324 (+) 984 WP_002890288.1 rhodanese-related sulfurtransferase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64827.69 Da        Isoelectric Point: 5.3001

>NTDB_id=969451 ACJVC4_RS02735 WP_002890275.1 545620..547356(+) (rcrP) [Streptococcus salivarius strain MRD-NRLLH]
MAYIWSYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDVDKLYAYAWVMFGVVLTGIVGRILLSYAVGKL
TTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQATLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIVLDEGEIVGRGRHEELMENND
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=969451 ACJVC4_RS02735 WP_002890275.1 545620..547356(+) (rcrP) [Streptococcus salivarius strain MRD-NRLLH]
ATGGCTTATATTTGGTCTTATCTCAGACGTTATCCTAAGTGGCTAGCAATGAATTTTACGGCAGCCATTTTATTTGTTAT
TGCTAACTTGGGCTTGCCGACTGTTCTTGCCAGAATGATTGATGAGGGAATAAACCGTGGTGATGTTGATAAGCTTTACG
CTTATGCTTGGGTCATGTTTGGTGTAGTTTTGACTGGGATTGTTGGTCGTATACTTCTGTCCTATGCGGTTGGTAAGTTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCCCACCACGAGTATGAGCAGAT
AGGGGTATCCTCTTTGGTGACTCGTATTACATCAGATGCTTTTGTGCTTATGCAGTTTGCGGATCAGGTTCTTAAGCTAG
GGGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTTTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCA
ATCTCCTTGCCTTTCCTAGCCGTAGTAGTATGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAACAACAGGCAAC
TCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATCCGTGCTTTTGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAACAAACTTTTCAAATTGACTGGTTTGACCGAG
CCACTTTTTGTGCAAATCATCATTGCCATGATTGTGGCAATTGTTTGGTTTGCTCTTGAGCCATTAGGTTCTGGGACTTT
GGCGATCGGGGATTTGGTTGCCTTTATTGAGTACAGCTTCCATGCACTATTGTCCTTCCTCTTCCTAGCTAATCTTTTTA
CCATGTATCCTCGTACAGCGGTATCTAGTGAACGTCTGCAGGAAATTATGGATATGCCGATTTCTATCAATCCAAATGAA
GATGGGGTGACAGAGACCGAGACTAAGGGATATTTGGAATTTGACAATGTGACCTTTGCCTATCCCGGTGAAACTGAAAG
TCCTGTCCTACACAACATTTCTTTCAAGGCAAAACCAGGTGAAACCATTGCCTTTATTGGGTCTACGGGTTCAGGAAAAT
CATCACTTGTACAGTTGATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTTGATGGTGTAGATGTCCGTGAT
TACAATCTTAAGGCTCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCCCTACTCTTTACAGGGACTATTGGTGAAAA
TATCCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAGGGTGGTAGCAACCTTTCTGGTGGTCAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTTTATATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGCCGTCGTCTAAAAGAAGTGACTCAAGATGCGACAGTCCTGATTGTAGCCCAACGTGTGGGAACTATCATGG
ATGCTGATCAAATCATTGTTTTGGATGAAGGTGAAATCGTTGGTCGTGGCCGTCATGAAGAGCTTATGGAAAATAATGAC
ATTTACCGTGAAATTGCTAATTCACAATTGAATCAAAAGAGTCTTACGGAGGACTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(17-279)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7T6G1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.038

92.042

0.369