Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   MHI32_RS15395 Genome accession   NZ_CP150281
Coordinates   3492442..3494193 (-) Length   583 a.a.
NCBI ID   WP_340010147.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL H7-0690     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 3487442..3499193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI32_RS15380 (MHI32_15380) - 3487999..3488934 (+) 936 WP_081383287.1 carbohydrate ABC transporter permease -
  MHI32_RS15385 (MHI32_15385) - 3489025..3490587 (+) 1563 WP_340010146.1 ABC transporter substrate-binding protein -
  MHI32_RS15390 (MHI32_15390) rcrQ 3490682..3492442 (-) 1761 WP_036677200.1 ABC transporter ATP-binding protein Regulator
  MHI32_RS15395 (MHI32_15395) rcrP 3492442..3494193 (-) 1752 WP_340010147.1 ABC transporter ATP-binding protein Regulator
  MHI32_RS15400 (MHI32_15400) - 3494313..3495368 (-) 1056 WP_340010149.1 HAMP domain-containing sensor histidine kinase -
  MHI32_RS15405 (MHI32_15405) - 3495365..3496039 (-) 675 WP_036677195.1 response regulator transcription factor -
  MHI32_RS15410 (MHI32_15410) - 3496365..3497330 (+) 966 WP_076281835.1 aldo/keto reductase -
  MHI32_RS15415 (MHI32_15415) - 3497367..3498218 (+) 852 WP_340010152.1 aldo/keto reductase -

Sequence


Protein


Download         Length: 583 a.a.        Molecular weight: 63913.42 Da        Isoelectric Point: 7.7402

>NTDB_id=969364 MHI32_RS15395 WP_340010147.1 3492442..3494193(-) (rcrP) [Paenibacillus sp. FSL H7-0690]
MVTILKYLKPKEWTLIGISILFIVTQVWLDLELPGYMSKITRLVQIPGSEMSEIIAAGGWMLLCALGSLATSIIVAGIAA
KIAANFSSRLRSKLFDKVQSFSMEEINNFSTASLITRSTNDITQVQMLIVIGLQLLVKAPILAVWAMLKITGKSWQWSLA
TGVAIGVLILIVGIVIVLVLPKFQNLQQLTDNLNRVARENLTGLRVIRAYNAESYQEDKFSVANSELTRTNLFANNVLSM
MMPSISLIMSGLSLAIYWIGAILIQNANGTAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILMPRAHVSAKRINEVLDTK
PSLENGSLTSSKANRLGEVEFKNVSFKYPDAEEYVIEDISFTVKKGETVAFIGSTGCGKSTVVNLIPRFYDATAGEVLVD
GINVNQYEQTALRNKMGYVSQKAILFGGTVSSNVAFGDNGSDLSSDVVDAIFTSQASDFVEKMEGSYEAHVSQGGTNLSG
GQKQRLSIARAIARRPEILIFDDSFSALDYKTDRKLRSELKKKSSGTTILIVAQRIGTIKDADKIIVLEAGRMAGMGTHD
ELMQTCDVYQEIAYSQLSKEELA

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=969364 MHI32_RS15395 WP_340010147.1 3492442..3494193(-) (rcrP) [Paenibacillus sp. FSL H7-0690]
ATGGTAACTATACTTAAGTACTTAAAACCGAAGGAATGGACCCTAATCGGTATCAGTATCCTGTTCATTGTCACACAGGT
ATGGCTGGATCTGGAATTGCCCGGTTATATGAGCAAGATTACTCGTCTTGTACAGATACCAGGAAGTGAAATGAGCGAAA
TCATTGCAGCCGGAGGCTGGATGTTGCTCTGTGCCCTCGGCAGCTTAGCTACATCAATCATAGTGGCAGGGATCGCCGCT
AAAATTGCCGCCAACTTCTCTTCAAGATTACGCTCTAAATTGTTTGATAAGGTACAATCTTTTTCTATGGAAGAAATCAA
CAACTTCTCAACAGCTAGTTTAATTACCCGTTCAACGAATGACATTACGCAAGTGCAAATGCTGATTGTCATTGGTCTGC
AACTGCTGGTGAAGGCTCCCATCCTTGCCGTTTGGGCAATGCTCAAAATTACAGGCAAGAGTTGGCAGTGGTCGCTTGCT
ACCGGTGTCGCCATTGGGGTATTGATTCTTATTGTCGGCATAGTGATCGTGCTAGTGCTTCCGAAATTCCAAAATTTGCA
GCAACTGACTGATAATCTTAATCGTGTTGCAAGAGAGAATCTTACCGGCCTTCGTGTCATTCGTGCGTATAATGCGGAAA
GTTACCAGGAAGATAAATTTAGCGTAGCCAACAGCGAGCTTACCCGAACGAATTTATTCGCCAATAATGTACTGTCCATG
ATGATGCCAAGTATTTCTCTGATTATGAGCGGTTTAAGTCTCGCAATATATTGGATTGGTGCTATTTTGATTCAAAATGC
CAATGGTACGGCGAAGATGGGCTTATTTTCAGATATGATTGTCTTCTCATCCTATGCAATGCAGGTGGTTATGGCATTTA
TGATGCTGATCATGATTTTTATCCTGATGCCTCGTGCCCATGTATCCGCTAAAAGAATCAATGAAGTGCTGGATACTAAG
CCAAGCTTAGAGAACGGATCACTTACTTCCTCCAAGGCAAATCGGTTGGGTGAGGTCGAATTCAAAAATGTCAGCTTTAA
ATATCCGGATGCAGAAGAATACGTTATTGAAGATATCAGCTTTACGGTGAAAAAAGGAGAAACTGTAGCCTTCATCGGTT
CAACCGGATGCGGAAAAAGTACCGTCGTGAACCTGATTCCTCGCTTTTATGATGCTACAGCAGGTGAAGTGTTGGTGGAT
GGAATTAATGTTAACCAATATGAGCAAACTGCACTGCGCAATAAAATGGGATATGTATCTCAGAAAGCGATTTTGTTTGG
CGGCACGGTGAGCTCTAATGTTGCTTTTGGCGATAATGGCAGTGATCTGTCCTCGGATGTTGTTGATGCCATTTTCACCT
CTCAAGCTTCAGATTTTGTTGAAAAGATGGAAGGAAGCTACGAGGCTCATGTCTCTCAAGGCGGTACGAACTTGTCTGGC
GGTCAAAAACAACGTCTTTCCATTGCCCGAGCCATTGCCCGTCGTCCTGAAATATTAATCTTCGACGATTCCTTCTCAGC
GCTTGATTATAAGACGGATCGCAAATTGCGAAGTGAATTGAAGAAAAAATCCAGCGGTACAACGATACTAATCGTTGCCC
AACGGATCGGTACAATCAAAGACGCAGACAAAATCATTGTACTGGAAGCCGGACGAATGGCAGGCATGGGAACACATGAT
GAATTGATGCAGACCTGTGATGTCTACCAAGAGATTGCTTACTCACAACTTTCAAAGGAGGAGCTAGCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.013

100

0.532


Multiple sequence alignment