Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MHI32_RS15390 Genome accession   NZ_CP150281
Coordinates   3490682..3492442 (-) Length   586 a.a.
NCBI ID   WP_036677200.1    Uniprot ID   A0A1R0X3U5
Organism   Paenibacillus sp. FSL H7-0690     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3485682..3497442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI32_RS15375 (MHI32_15375) - 3487026..3487985 (+) 960 WP_038574490.1 ABC transporter permease subunit -
  MHI32_RS15380 (MHI32_15380) - 3487999..3488934 (+) 936 WP_081383287.1 carbohydrate ABC transporter permease -
  MHI32_RS15385 (MHI32_15385) - 3489025..3490587 (+) 1563 WP_340010146.1 ABC transporter substrate-binding protein -
  MHI32_RS15390 (MHI32_15390) rcrQ 3490682..3492442 (-) 1761 WP_036677200.1 ABC transporter ATP-binding protein Regulator
  MHI32_RS15395 (MHI32_15395) rcrP 3492442..3494193 (-) 1752 WP_340010147.1 ABC transporter ATP-binding protein Regulator
  MHI32_RS15400 (MHI32_15400) - 3494313..3495368 (-) 1056 WP_340010149.1 HAMP domain-containing sensor histidine kinase -
  MHI32_RS15405 (MHI32_15405) - 3495365..3496039 (-) 675 WP_036677195.1 response regulator transcription factor -
  MHI32_RS15410 (MHI32_15410) - 3496365..3497330 (+) 966 WP_076281835.1 aldo/keto reductase -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64511.79 Da        Isoelectric Point: 6.5784

>NTDB_id=969363 MHI32_RS15390 WP_036677200.1 3490682..3492442(-) (rcrQ) [Paenibacillus sp. FSL H7-0690]
MNKSKEQLNTWSKLLHYCRKYIPVVLIAIISAAIGTVLTLLGPDKLSEMTDLITAGLVTGIDMEAVTSIGLFLVFIYILS
AVLSLVQGLIMSAVTQKVSKNLRADLSRKMNKLPISYYNNSTTGDILSRVTNDVDTIGQALNQSVGTLVTALALFTGSII
MMFKTNVIMTITAVVATIIGFGLIAAIMKKSQKYFQSQQEYLGKINGHVEEVYTGHTVVKAYNGESQMRNTFESLNMNLK
DSAFKAQFLSGLMMPIMMFIGNLGFVAVCVVGAVLAMNGTISFGVIVAFILYVRYFTQPLSQIAQAAQSLQSASAASKRV
FEFLDADEMDNESHKERHLKTAVGKVDFEHVQFAYENSDKLVIKDFSAEIKPGQKIAIVGPTGAGKTTLINLLIRFNELK
GGEIYIDDTPISSLTRENIHDLFCMVLQDTWLFEGTIRENLVYNKTGVTDKEVEDACKSVGLHHFIQTLSAGYNTILNDK
VNLSTGQKQQLTIARAMLKNAPMLILDEATSSVDTRTELLIQQAMDKLMEGRTSFVIAHRLSTIKNADVILVLKEGDILE
SGSHEELLAKNGFYAELYNSQFDQAS

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=969363 MHI32_RS15390 WP_036677200.1 3490682..3492442(-) (rcrQ) [Paenibacillus sp. FSL H7-0690]
ATGAACAAAAGCAAAGAGCAACTCAACACGTGGAGCAAACTTCTCCACTATTGCAGAAAATATATCCCTGTAGTTCTTAT
AGCTATTATTAGTGCAGCAATCGGTACGGTTCTGACTCTGCTTGGACCGGATAAGCTTTCGGAGATGACAGACTTGATCA
CGGCCGGCCTCGTCACCGGAATTGATATGGAAGCAGTAACTTCTATCGGCCTTTTCCTTGTATTTATCTATATCCTTAGC
GCTGTGTTATCTTTGGTACAAGGATTAATTATGTCCGCAGTTACGCAAAAGGTCTCCAAAAACTTAAGAGCCGATCTCTC
ACGCAAAATGAACAAACTTCCGATCTCTTATTATAATAATTCTACAACCGGTGACATCCTGTCCCGGGTTACCAACGATG
TGGATACGATCGGGCAAGCTTTAAACCAAAGCGTAGGCACATTGGTAACTGCCCTTGCCCTCTTTACGGGATCCATCATC
ATGATGTTCAAAACAAATGTGATCATGACTATTACGGCGGTAGTTGCAACTATCATTGGCTTTGGCCTCATAGCGGCAAT
TATGAAAAAATCCCAAAAGTATTTTCAAAGTCAGCAAGAATACTTAGGGAAAATCAATGGCCATGTGGAGGAAGTATATA
CAGGACATACTGTAGTGAAAGCCTACAATGGTGAATCACAAATGCGCAATACATTTGAATCCCTGAATATGAATCTTAAA
GATAGTGCATTTAAAGCGCAGTTCCTATCCGGTCTTATGATGCCGATTATGATGTTTATAGGCAATCTAGGTTTTGTGGC
CGTTTGTGTAGTTGGTGCTGTACTTGCTATGAACGGAACGATATCCTTTGGGGTCATTGTAGCCTTTATACTGTATGTCC
GTTACTTTACACAACCGCTCTCTCAGATTGCTCAAGCCGCACAAAGTCTGCAATCGGCTTCCGCAGCAAGCAAACGTGTC
TTTGAGTTCCTCGATGCTGATGAAATGGACAATGAAAGTCATAAAGAAAGACATCTTAAAACTGCAGTGGGCAAAGTGGA
TTTTGAACATGTGCAATTTGCTTATGAAAATTCAGATAAACTTGTGATTAAAGATTTTTCTGCAGAGATTAAGCCTGGGC
AAAAAATTGCTATAGTCGGTCCTACCGGCGCAGGTAAAACTACACTGATAAATCTTCTAATACGGTTTAATGAATTAAAG
GGCGGAGAAATATATATTGATGATACCCCCATCAGCAGCTTAACAAGAGAAAACATCCATGATCTATTCTGTATGGTCTT
GCAGGACACCTGGCTTTTTGAGGGCACTATCAGGGAAAATCTAGTGTACAACAAAACAGGTGTAACCGATAAAGAAGTTG
AAGATGCTTGTAAGTCGGTAGGCTTGCATCATTTCATTCAGACCTTAAGTGCCGGTTACAATACCATACTAAATGACAAG
GTTAATTTATCCACCGGCCAAAAGCAACAGCTTACCATCGCCCGCGCGATGCTCAAAAATGCTCCAATGCTCATCCTCGA
TGAAGCTACAAGCTCAGTCGATACAAGAACAGAGCTCTTGATTCAGCAGGCAATGGATAAGCTTATGGAAGGAAGAACCT
CCTTTGTTATTGCGCATAGACTCTCAACCATTAAGAACGCCGATGTGATTCTGGTTCTGAAGGAAGGCGATATTCTGGAA
AGCGGCAGCCACGAAGAACTACTTGCCAAAAATGGTTTCTATGCGGAGCTTTATAATAGCCAATTTGATCAAGCCTCTTA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-300)

ABC transporter (ABC_tran)

(364-511)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1R0X3U5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

54.717

99.488

0.544

Multiple sequence alignment