Detailed information NTG0969296

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: MHB62_RS19435
• Genome accession: NZ_CP150278
• Coordinates: 3727004..3728149 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-0255
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3722004..3733149

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHB62_RS19410 (MHB62_19400)	-	3722020..3723300 (+)	1281	WP_032722698.1	pitrilysin family protein	-
MHB62_RS19415 (MHB62_19405)	albG	3723297..3723998 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
MHB62_RS19420 (MHB62_19410)	-	3724004..3725380 (-)	1377	WP_032722701.1	YncE family protein	-
MHB62_RS19425 (MHB62_19415)	-	3725419..3726774 (-)	1356	WP_032722703.1	YncE family protein	-
MHB62_RS19430 (MHB62_19420)	-	3726771..3727001 (-)	231	WP_009968328.1	hypothetical protein	-
MHB62_RS19435 (MHB62_19425)	rapF	3727004..3728149 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
MHB62_RS19440 (MHB62_19430)	phrF	3728133..3728252 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
MHB62_RS19445 (MHB62_19435)	-	3728366..3728816 (+)	451	Protein_3770	YbaK/EbsC family protein	-
MHB62_RS19450 (MHB62_19440)	speB	3728848..3729720 (-)	873	WP_032722706.1	agmatinase	-
MHB62_RS19455 (MHB62_19445)	speE	3729781..3730611 (-)	831	WP_003227543.1	spermidine synthase	-
MHB62_RS19460 (MHB62_19450)	-	3730813..3732888 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=969296 MHB62_RS19435 WP_003227549.1 3727004..3728149(+) (rapF) [Bacillus sp. FSL K6-0255]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=969296 MHB62_RS19435 WP_003227549.1 3727004..3728149(+) (rapF) [Bacillus sp. FSL K6-0255]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572