Detailed information NTG0969166

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ACLIMA_RS06310
• Genome accession: NZ_CP177039
• Coordinates: 1252515..1253432 (+)
• Length: 305 a.a.
• NCBI ID: WP_003180613.1
• Uniprot ID: A0AA90ETR0
• Organism: Bacillus licheniformis strain MPB04
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1247515..1258432

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLIMA_RS06295 (ACLIMA_06295)	trpS	1248124..1249116 (-)	993	WP_185855185.1	tryptophan--tRNA ligase	-
ACLIMA_RS06300 (ACLIMA_06300)	-	1249854..1251479 (+)	1626	WP_003180610.1	peptide ABC transporter substrate-binding protein	-
ACLIMA_RS06305 (ACLIMA_06305)	-	1251575..1252510 (+)	936	WP_003180611.1	ABC transporter permease	-
ACLIMA_RS06310 (ACLIMA_06310)	amiD	1252515..1253432 (+)	918	WP_003180613.1	ABC transporter permease	Regulator
ACLIMA_RS06315 (ACLIMA_06315)	-	1253446..1254513 (+)	1068	WP_003180615.1	ABC transporter ATP-binding protein	-
ACLIMA_RS06320 (ACLIMA_06320)	-	1254515..1255438 (+)	924	WP_011197769.1	ABC transporter ATP-binding protein	-
ACLIMA_RS06325 (ACLIMA_06325)	-	1255669..1256247 (+)	579	WP_003180619.1	GNAT family N-acetyltransferase	-
ACLIMA_RS06330 (ACLIMA_06330)	spxA	1256425..1256820 (+)	396	WP_009328833.1	transcriptional regulator SpxA	-
ACLIMA_RS06335 (ACLIMA_06335)	-	1257043..1257705 (-)	663	WP_009328832.1	TerC family protein	-
ACLIMA_RS06340 (ACLIMA_06340)	-	1257881..1258009 (+)	129	Protein_1194	hypothetical protein	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33952.29 Da
• Isoelectric Point: 8.8249

>NTDB_id=969166 ACLIMA_RS06310 WP_003180613.1 1252515..1253432(+) (amiD) [Bacillus licheniformis strain MPB04]
MQQIPKDMFEPAAVDHSEAEKISKKNLSFWTDVFLRFKENKLALFGLVVLILIALMAIFAPVFSSFQYEETDLTNANQPP
SGEHWFGTDDLGRDVFVRTWVGARISLTIGLAAALIDVLIGVIWGAISGIRGGRTDEIMMRIADILWAIPSLLMTILLLV
VMGKGLITMIVAMVITGWINMARIVRGQVLQLKNQEFVLASRTLGAKNSRIIRKHLLPNIMSPILVTMTLTVPTAIFYEA
FLSYLGLGVPQPLASWGTMATDGVQGLEYYPWRLFFPATFICLTMFAFNVIGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=969166 ACLIMA_RS06310 WP_003180613.1 1252515..1253432(+) (amiD) [Bacillus licheniformis strain MPB04]
ATGCAGCAAATACCAAAAGACATGTTTGAACCTGCAGCTGTTGACCATAGCGAAGCCGAAAAGATCTCAAAGAAAAACCT
TTCTTTTTGGACAGACGTATTCTTGAGATTTAAAGAAAACAAGCTGGCGCTGTTTGGACTGGTGGTTCTGATCCTGATCG
CTCTGATGGCTATCTTCGCGCCGGTGTTCTCAAGCTTTCAATATGAAGAAACAGATTTAACGAATGCGAACCAGCCGCCA
AGCGGTGAGCACTGGTTTGGAACAGATGACCTTGGAAGGGACGTATTCGTCCGTACATGGGTCGGCGCCCGCATCTCGCT
GACAATCGGACTCGCTGCTGCGCTGATCGACGTTTTGATCGGTGTGATATGGGGTGCGATTTCCGGCATCAGAGGCGGAC
GTACGGATGAAATTATGATGAGAATAGCAGATATTTTATGGGCGATTCCTTCTTTATTAATGACCATCCTGCTGCTCGTT
GTTATGGGAAAAGGCCTGATCACGATGATCGTGGCGATGGTTATTACGGGCTGGATCAACATGGCGAGAATCGTCCGGGG
CCAAGTACTCCAGCTTAAAAATCAGGAGTTCGTACTCGCCTCAAGAACATTGGGAGCGAAAAACTCGCGCATTATCAGAA
AGCACCTGCTGCCCAACATCATGAGCCCGATCTTGGTCACCATGACATTAACCGTTCCTACGGCTATTTTCTATGAGGCG
TTTTTAAGCTACCTCGGCCTCGGGGTTCCGCAGCCGCTTGCAAGCTGGGGAACGATGGCAACAGACGGTGTTCAGGGATT
GGAATACTACCCTTGGCGCCTGTTCTTCCCGGCTACTTTTATCTGTCTGACCATGTTTGCATTCAACGTTATCGGCGACG
GACTGCGCGACGCTTTAGATCCGAAGCTGCGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-80)

3D structure

• AlphaFold DB: A0AA90ETR0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	35.922	100	0.364
amiD	Streptococcus thermophilus LMG 18311	35.599	100	0.361
amiD	Streptococcus thermophilus LMD-9	35.599	100	0.361