Detailed information NTG0969152

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACLIMA_RS05420
• Genome accession: NZ_CP177039
• Coordinates: 1070109..1071227 (+)
• Length: 372 a.a.
• NCBI ID: WP_145722066.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain MPB04
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1065109..1076227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLIMA_RS05395 (ACLIMA_05395)	-	1065309..1066814 (+)	1506	WP_185855181.1	coproporphyrinogen III oxidase	-
ACLIMA_RS05400 (ACLIMA_05400)	-	1066896..1068107 (-)	1212	WP_003180218.1	cation:proton antiporter	-
ACLIMA_RS05405 (ACLIMA_05405)	-	1068114..1068611 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
ACLIMA_RS05410 (ACLIMA_05410)	-	1068676..1069005 (-)	330	WP_016886161.1	hypothetical protein	-
ACLIMA_RS05415 (ACLIMA_05415)	-	1069206..1069982 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
ACLIMA_RS05420 (ACLIMA_05420)	rapC	1070109..1071227 (+)	1119	WP_145722066.1	Rap family tetratricopeptide repeat protein	Regulator
ACLIMA_RS05425 (ACLIMA_05425)	-	1071217..1071354 (+)	138	WP_016886158.1	hypothetical protein	-
ACLIMA_RS05430 (ACLIMA_05430)	-	1071359..1071637 (+)	279	WP_003180226.1	hypothetical protein	-
ACLIMA_RS05435 (ACLIMA_05435)	-	1071712..1071897 (-)	186	WP_003180228.1	YhzD family protein	-
ACLIMA_RS05440 (ACLIMA_05440)	-	1072015..1072911 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
ACLIMA_RS05445 (ACLIMA_05445)	-	1072904..1074172 (+)	1269	WP_003180232.1	ABC transporter permease	-
ACLIMA_RS05450 (ACLIMA_05450)	-	1074292..1075518 (+)	1227	WP_009328954.1	exonuclease SbcCD subunit D	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43405.11 Da
• Isoelectric Point: 5.5287

>NTDB_id=969152 ACLIMA_RS05420 WP_145722066.1 1070109..1071227(+) (rapC) [Bacillus licheniformis strain MPB04]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFYRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=969152 ACLIMA_RS05420 WP_145722066.1 1070109..1071227(+) (rapC) [Bacillus licheniformis strain MPB04]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTTACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

• Tetratricopeptide repeat (TPR_12) (195-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374