Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   MHH79_RS06240 Genome accession   NZ_CP150275
Coordinates   1203611..1204762 (+) Length   383 a.a.
NCBI ID   WP_063335042.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0993     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1198611..1209762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH79_RS06205 (MHH79_06205) - 1199284..1200501 (+) 1218 WP_080467291.1 MFS transporter -
  MHH79_RS06210 (MHH79_06210) - 1200664..1201242 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  MHH79_RS06215 (MHH79_06215) spx 1201423..1201818 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  MHH79_RS06220 (MHH79_06220) - 1201861..1202517 (-) 657 WP_003232944.1 TerC family protein -
  MHH79_RS06225 (MHH79_06225) - 1202687..1202827 (+) 141 WP_119122854.1 hypothetical protein -
  MHH79_RS06230 (MHH79_06230) mecA 1202794..1203450 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  MHH79_RS06235 (MHH79_06235) - 1203445..1203567 (-) 123 WP_021479547.1 hypothetical protein -
  MHH79_RS06240 (MHH79_06240) coiA 1203611..1204762 (+) 1152 WP_063335042.1 competence protein CoiA Machinery gene
  MHH79_RS06245 (MHH79_06245) pepF 1204992..1206821 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  MHH79_RS06250 (MHH79_06250) - 1206859..1207026 (-) 168 WP_003244944.1 hypothetical protein -
  MHH79_RS06255 (MHH79_06255) spxH 1207341..1208240 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  MHH79_RS06260 (MHH79_06260) - 1208237..1208635 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  MHH79_RS06265 (MHH79_06265) cwlQ 1208890..1209624 (-) 735 WP_041340378.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44896.08 Da        Isoelectric Point: 9.9344

>NTDB_id=969095 MHH79_RS06240 WP_063335042.1 1203611..1204762(+) (coiA) [Bacillus sp. FSL K6-0993]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDIMARIKEHMLAVEYQCATIAPNVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYKELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAVVDDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIHFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=969095 MHH79_RS06240 WP_063335042.1 1203611..1204762(+) (coiA) [Bacillus sp. FSL K6-0993]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGCCTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACATCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCACCAAATGTCTTTCAGAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAAGGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTTAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGTTGTAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACACCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCATTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGATTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGTGGCATACACTCAATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.319

97.389

0.948


Multiple sequence alignment