Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   MHH79_RS01955 Genome accession   NZ_CP150275
Coordinates   362480..362878 (-) Length   132 a.a.
NCBI ID   WP_015252845.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0993     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 357480..367878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH79_RS01920 (MHH79_01920) - 358226..358423 (+) 198 WP_120363256.1 hypothetical protein -
  MHH79_RS01925 (MHH79_01925) - 358443..358898 (+) 456 WP_024572178.1 RDD family protein -
  MHH79_RS01930 (MHH79_01930) - 358980..359312 (+) 333 WP_047182065.1 YckD family protein -
  MHH79_RS01935 (MHH79_01935) - 359440..359862 (+) 423 WP_174616579.1 MarR family transcriptional regulator -
  MHH79_RS01940 (MHH79_01940) - 359850..360191 (+) 342 WP_032724911.1 DUF3147 family protein -
  MHH79_RS01945 (MHH79_01945) - 360210..360938 (+) 729 WP_021481826.1 AAA family ATPase -
  MHH79_RS01950 (MHH79_01950) bglC 361010..362443 (+) 1434 WP_047182066.1 6-phospho-beta-glucosidase -
  MHH79_RS01955 (MHH79_01955) nin/comJ 362480..362878 (-) 399 WP_015252845.1 DNA-entry nuclease inhibitor Regulator
  MHH79_RS01960 (MHH79_01960) nucA/comI 362905..363354 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  MHH79_RS01965 (MHH79_01965) tlpC 363522..365243 (-) 1722 WP_047182067.1 methyl-accepting chemotaxis protein TlpC -
  MHH79_RS01970 (MHH79_01970) hxlB 365354..365911 (-) 558 WP_063336039.1 6-phospho-3-hexuloisomerase -
  MHH79_RS01975 (MHH79_01975) hxlA 365917..366549 (-) 633 WP_063336040.1 3-hexulose-6-phosphate synthase -
  MHH79_RS01980 (MHH79_01980) hxlR 366781..367143 (+) 363 WP_015482783.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.86 Da        Isoelectric Point: 4.7078

>NTDB_id=969075 MHH79_RS01955 WP_015252845.1 362480..362878(-) (nin/comJ) [Bacillus sp. FSL K6-0993]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=969075 MHH79_RS01955 WP_015252845.1 362480..362878(-) (nin/comJ) [Bacillus sp. FSL K6-0993]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCTATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985

Multiple sequence alignment