Detailed information    

insolico Bioinformatically predicted

Overview


Name   rok   Type   Regulator
Locus tag   MHH84_RS10570 Genome accession   NZ_CP150273
Coordinates   2010140..2010343 (+) Length   67 a.a.
NCBI ID   WP_003182112.1    Uniprot ID   A0A5Q3BNZ5
Organism   Bacillus sp. FSL K6-1109     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2005140..2015343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH84_RS10535 (MHH84_10535) - 2005156..2005620 (+) 465 WP_003182064.1 Fur family transcriptional regulator -
  MHH84_RS10540 (MHH84_10540) - 2005665..2006330 (+) 666 WP_009328436.1 GntR family transcriptional regulator -
  MHH84_RS10545 (MHH84_10545) - 2006338..2007306 (+) 969 WP_011197999.1 multidrug resistance efflux transporter family protein -
  MHH84_RS10550 (MHH84_10550) - 2007361..2008122 (-) 762 WP_017474794.1 N-acetylmuramoyl-L-alanine amidase -
  MHH84_RS10560 (MHH84_10560) - 2008655..2009137 (-) 483 WP_003182102.1 DMT family transporter -
  MHH84_RS10565 (MHH84_10565) - 2009160..2009612 (-) 453 WP_003182104.1 DMT family transporter -
  MHH84_RS10570 (MHH84_10570) rok 2010140..2010343 (+) 204 WP_003182112.1 hypothetical protein Regulator
  MHH84_RS10575 (MHH84_10575) - 2010557..2011180 (+) 624 WP_009328434.1 TetR/AcrR family transcriptional regulator -
  MHH84_RS10580 (MHH84_10580) - 2011377..2011568 (+) 192 WP_232252121.1 OsmC family protein -
  MHH84_RS10585 (MHH84_10585) - 2011601..2012950 (+) 1350 WP_011198001.1 cytosine permease -
  MHH84_RS10590 (MHH84_10590) - 2012975..2015080 (+) 2106 WP_011201659.1 hydantoinase/oxoprolinase family protein -

Sequence


Protein


Download         Length: 67 a.a.        Molecular weight: 8116.34 Da        Isoelectric Point: 9.8619

>NTDB_id=968998 MHH84_RS10570 WP_003182112.1 2010140..2010343(+) (rok) [Bacillus sp. FSL K6-1109]
MFNEREALRLRLEQLNNAEIQIIRELQSERKDIYSRLRELDRQKVSSSHHKKTLLELVDETVNLLKK

Nucleotide


Download         Length: 204 bp        

>NTDB_id=968998 MHH84_RS10570 WP_003182112.1 2010140..2010343(+) (rok) [Bacillus sp. FSL K6-1109]
GTGTTCAACGAAAGAGAGGCGCTCCGATTAAGACTGGAGCAACTGAACAATGCCGAGATTCAGATCATACGCGAACTCCA
AAGTGAGCGGAAAGACATTTATTCCAGGCTGCGGGAATTAGATCGTCAAAAAGTTTCTTCATCACATCATAAAAAAACTT
TATTAGAGTTAGTCGATGAAACTGTAAATCTCTTGAAAAAATAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5Q3BNZ5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

70.213

70.149

0.493


Multiple sequence alignment