Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   AACH35_RS03175 Genome accession   NZ_AP028993
Coordinates   683459..684133 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain TUM19959     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 678459..689133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH35_RS03150 (TUM19959_05880) - 678674..679741 (+) 1068 WP_000980142.1 membrane protein -
  AACH35_RS03155 (TUM19959_05890) - 679892..680935 (+) 1044 WP_001078080.1 alpha/beta hydrolase -
  AACH35_RS03160 (TUM19959_05900) - 681264..681692 (+) 429 WP_000198504.1 hypothetical protein -
  AACH35_RS03165 (TUM19959_05910) - 681901..682407 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  AACH35_RS03170 (TUM19959_05920) graX 682520..683443 (+) 924 WP_000802952.1 auxiliary protein GraX/ApsX -
  AACH35_RS03175 (TUM19959_05930) braR 683459..684133 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  AACH35_RS03180 (TUM19959_05940) graS 684126..685166 (+) 1041 WP_001061259.1 histidine kinase GraS/ApsS -
  AACH35_RS03185 (TUM19959_05950) vraF 685313..686074 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  AACH35_RS03190 (TUM19959_05960) - 686064..687953 (+) 1890 WP_000009398.1 ABC transporter permease -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=96889 AACH35_RS03175 WP_001166505.1 683459..684133(+) (braR) [Staphylococcus aureus strain TUM19959]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=96889 AACH35_RS03175 WP_001166505.1 683459..684133(+) (braR) [Staphylococcus aureus strain TUM19959]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAATGTGCCAATATTATTCTTATCATCTCGT
GACAACCCGATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGACAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCTAAAACAGAAATGATTATTTTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402


Multiple sequence alignment