Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MHI44_RS19255 Genome accession   NZ_CP150268
Coordinates   3664479..3665054 (+) Length   191 a.a.
NCBI ID   WP_339202542.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1366     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3659479..3670054
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI44_RS19225 (MHI44_19225) dapD 3659666..3660376 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MHI44_RS19230 (MHI44_19230) - 3660446..3661570 (+) 1125 WP_119899295.1 N-acetyldiaminopimelate deacetylase -
  MHI44_RS19235 (MHI44_19235) - 3661632..3661877 (+) 246 WP_003232382.1 YkuS family protein -
  MHI44_RS19240 (MHI44_19240) mscT 3661914..3662717 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  MHI44_RS19245 (MHI44_19245) ahpA 3662954..3663496 (+) 543 WP_339202541.1 biofilm-specific peroxidase AhpA -
  MHI44_RS19250 (MHI44_19250) ykuV 3663567..3664013 (+) 447 WP_213385270.1 TlpA disulfide reductase family protein -
  MHI44_RS19255 (MHI44_19255) rok 3664479..3665054 (+) 576 WP_339202542.1 transcriptional regulator Rok Regulator
  MHI44_RS19260 (MHI44_19260) cse15 3665095..3666060 (-) 966 WP_029317734.1 spore protein Cse15 -
  MHI44_RS19265 (MHI44_19265) - 3666197..3666796 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  MHI44_RS19270 (MHI44_19270) - 3666847..3667866 (+) 1020 WP_339202543.1 molybdopterin-synthase adenylyltransferase MoeB -
  MHI44_RS19275 (MHI44_19275) glp 3667884..3669176 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  MHI44_RS19280 (MHI44_19280) mobB 3669137..3669658 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21811.84 Da        Isoelectric Point: 9.8490

>NTDB_id=968854 MHI44_RS19255 WP_339202542.1 3664479..3665054(+) (rok) [Bacillus sp. FSL K6-1366]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDKNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=968854 MHI44_RS19255 WP_339202542.1 3664479..3665054(+) (rok) [Bacillus sp. FSL K6-1366]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAAAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

99.476

100

0.995

Multiple sequence alignment