Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   MHI44_RS17650 Genome accession   NZ_CP150268
Coordinates   3378505..3379458 (+) Length   317 a.a.
NCBI ID   WP_339203572.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1366     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3373505..3384458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI44_RS17625 (MHI44_17625) argF 3375338..3376297 (+) 960 WP_339202497.1 ornithine carbamoyltransferase -
  MHI44_RS17630 (MHI44_17630) - 3376383..3376562 (+) 180 WP_003245356.1 YjzC family protein -
  MHI44_RS17635 (MHI44_17635) - 3376608..3376793 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  MHI44_RS17640 (MHI44_17640) - 3377042..3377776 (+) 735 WP_032721340.1 hypothetical protein -
  MHI44_RS17645 (MHI44_17645) - 3377858..3378415 (+) 558 WP_015252365.1 hypothetical protein -
  MHI44_RS17650 (MHI44_17650) med 3378505..3379458 (+) 954 WP_339203572.1 transcriptional regulator Med Regulator
  MHI44_RS17655 (MHI44_17655) comZ 3379473..3379664 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  MHI44_RS17660 (MHI44_17660) yjzB 3379694..3379933 (-) 240 WP_003232972.1 spore coat protein YjzB -
  MHI44_RS17665 (MHI44_17665) fabH 3380098..3381036 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  MHI44_RS17670 (MHI44_17670) fabF 3381059..3382300 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  MHI44_RS17675 (MHI44_17675) - 3382376..3383161 (+) 786 WP_014479439.1 DUF2268 domain-containing protein -
  MHI44_RS17680 (MHI44_17680) appD 3383353..3384339 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35368.88 Da        Isoelectric Point: 4.5558

>NTDB_id=968844 MHI44_RS17650 WP_339203572.1 3378505..3379458(+) (med) [Bacillus sp. FSL K6-1366]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEDGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=968844 MHI44_RS17650 WP_339203572.1 3378505..3379458(+) (med) [Bacillus sp. FSL K6-1366]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTATGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGACGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.369

100

0.994


Multiple sequence alignment